Job Description P0ACA1 Confidence 99.95% Date Thu Jan 5 11:17:42 GMT 2012 Rank 31 Aligned Residues 196 % Identity 15% Template c1k0dB_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:ure2 protein; PDBTitle: ure2p in complex with glutathione Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																							.	.	.																			.	.
Query SS confidence																																							.	.	.																			.	.
Query Sequence		M	K	L	V	G	S	Y	T	S	P	F	V	R	K	L	S	I	L	L	L	E	K	G	I	T	F	E	F	I	N	E	L	P	Y	N	A	D	.	.	.	N	G	V	A	Q	F	N	P	L	G	K	V	P	V	L	V	T	E	.	.	E	G	E	C	W	F	D	S	P	I	I	A	E	Y	I	E	L	M	N	V
Query Conservation																																							.	.	.																			.	.
Alig confidence																																							.	.	.																			.	.
Template Conservation
Template Sequence		Y	T	L	F	S	H	R	S	A	P	N	G	F	K	V	A	I	V	L	S	E	L	G	F	H	Y	N	T	I	F	L	D	F	N	L	G	E	H	R	A	P	E	F	V	S	V	N	P	N	A	R	V	P	A	L	I	D	H	G	M	D	N	L	S	I	W	E	S	G	A	I	L	L	H	L	V	N	K	Y	Y
Template Known Secondary structure								T	T														T	T										G	G	G	T	G	G	G	S								T	T			S						G	G	G	T	S					S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
						76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140											.
Predicted Secondary structure		.	.	.	.																																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	A	P	A	M	L	P	R	D	P	L	E	S	L	R	V	R	K	I	E	A	L	A	D	G	I	M	D	A	G	L	V	S	V	R	E	Q	A	R	P	A	A	Q	Q	S	E	D	E	L	L	R	Q	R	E	K	I	N	R	S	L	D	V	L	E	G	Y	.	.	.	.	.	.	.	.	.	.	L
Query Conservation		.	.	.	.																																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																																																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	T	G	N	P	L	L	W	S	D	D	L	A	D	Q	S	Q	I	N	A	W	L	F	F	Q	T	S	G	H	A	P	M	I	G	Q	A	L	H	F	R	Y	F	H	S	Q	K	I	A	S	A	V	E	R	Y	T	D	E	V	R	R	V	Y	G	V	V	E	M	A	L	A	E	R	R	E	A	L	V	M	D
Template Known Secondary structure					S			T	T	S		S																			T													T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	G	T	L	K	T	D	T	V	N	L	A	T	I	A	I	A	C	A	V	G	Y	L	N	F	R	R	V	A	P	G	W	C	V	D	R	P	H	L	V	K	L	V	E	N	L	F	S	R	E	S	F	A	R	T	E
Query Conservation
Alig confidence																																.	.
Template Conservation																																.	.
Template Sequence		Y	P	V	W	L	V	G	D	K	L	T	I	A	D	L	A	F	V	P	W	N	N	V	V	D	R	I	G	I	N	.	.	I	K	I	E	F	P	E	V	Y	K	W	T	K	H	M	M	R	R	P	A	V	I	K	A	L
Template Known Secondary structure						S	B	T	T	B							T	T					T	T	G	G	G	G	T			.	.																	T	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions