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Job DescriptionP33013
Confidence98.92%DateThu Jan 5 11:50:49 GMT 2012
Rank70Aligned Residues139
% Identity27%Templated2dcfa1
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  WVLMDYTTGQILTAG. . . . . NEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEG
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Template Sequence  AFLV. LRGTEVVAEYYRAGFAPDDRHLLMAVSKSLCGTVVGALVDEGRIDPAQPVT. . . . . . . . EYVPELAGS. . . . . VY
Template Known Secondary structure  .TT
TT

TT


TTTTS

TTSBGG........GT
GGGTTS.....TT
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   84... ..90.........100.........110.........120.........130........ .140....... ..
 
   114.....120.........130 .........140
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Query Sequence  DRVSVRDLSRGLIVDSG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NDACVALADY
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Template Sequence  DGPSVLQVLD. . . MQISIDYNEDYVDPASEVQTHDRSAGWRTRRHGDPADTYEFLTTLRGDGSTGEFQYCSANTDVLAWI
Template Known Secondary structure  SS
BT...T
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S



SS
TTSTSS


TT

SST



S
BSS



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   150......... 160.........170.........180.........190.........200.........210.........220......
 
   141 ........150...... ...160.........170.. .......180.........190....
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Query Sequence  I. AGGQRQFVEMMNNYA. EKLHLKDTHFETVHGL. . . . DAPGQHSSAYDLAVLSRAIIHG
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Template Sequence  VERVTGLRYVEALSTYLWAKLDADRDATITVDTTGFGFANGGVSCTARDLARVGRMMLDG
Template Known Secondary structure 
S
TGGGTT
SS


B
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B
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   227..230.........240.........250.........260.........270.........280......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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