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Job DescriptionP33013
Confidence100.00%DateThu Jan 5 11:50:49 GMT 2012
Rank27Aligned Residues229
% Identity21%Templated2cc1a1
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution2.13

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  SWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVS
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Template Sequence  GLYAANLQSGRRI. THRPDEMFAMCSTFKGYVAARVLQMAEHGEISLDNRVFVDADA. . . . . . LVPNSPVTEARAGAEMT
Template Known Secondary structure  TTT

.STTS

GGGTTSS
TT


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TTTTS
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   45....50....... ..60.........70.........80.........90.........100 .........110.......
 
   118.120.........130.........140.........150.........160....... ..170.........180.........190.
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Query Sequence  VRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFE. . . . . . TVHGLDAPGQHSSAYDLAVLSRAI
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Template Sequence  LAELCQAALQRSDNTAANLLLKTIGG. . . . . PAAVTAFARSVGDERTRLDRWEVELNSAIPGDPRDTSTPAALAVGYRAI
Template Known Secondary structure  S

T.....TT

S



S
TTGGGG

TT

TT
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   119120.........130.........140.... .....150.........160.........170.........180.........190...
 
   192.......200.........210.........220.........230.........240......... 250......... 260.........
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Query Sequence  IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVD. GQRRLIAVVM. GADSAKGREE
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Template Sequence  LAG. DALSPPQRGLLEDWMRANQTSSMRAG. LPEGWTTADKTGSGDYGSTNDAGIAFGPDGQRLLLVMMTRSQAHDPKAE
Template Known Secondary structure  S.SSS
T
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SGGGG.S
TT

STT

TTS
SSS
TT

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   194.. ...200.........210.........220.. .......230.........240.........250.........260.........270.
 
   270.........280
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Query Sequence  EARKLLRWGQQ
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Template Sequence  NLRPLIGELTA
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   276...280......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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