Job Description P33013 Confidence 99.08% Date Thu Jan 5 11:50:49 GMT 2012 Rank 61 Aligned Residues 225 % Identity 18% Template d1yqsa1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.05

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.														.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	H	A	G	S	W	V	L	M	D	Y	T	T	G	Q	I	L	T	A	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	Q	Q	R	N	P	A	S	L	T	K	L	M	T	G	Y	V	V	D	R	A	I	D	S	H	R	I	T	P	D	D	I	V	T	V	G	R	D	A	W	A	K	D	N
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	P	G	A	M	V	R	V	D	D	.	.	.	N	G	T	I	H	Q	L	S	E	G	V	A	D	R	A	T	G	R	A	I	T	T	T	D	R	F	R	V	G	S	V	T	K	S	F	S	A	V	V	L	L	Q	L	V	D	E	G	K	L	D	L	D	A	S	V	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T		S									.	.	.	T	T									B	S		T	T	T			B			T	T		B				G	G	G															T	T	S			T	T	S	B		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	F	V	G	S	S	L	M	F	L	K	E	G	D	R	V	S	V	R	D	L	S	R	G	L	I	V	D	S	G	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	N	T	Y	L	P	G	L	L	P	D	D	R	I	T	V	R	Q	V	M	S	H	R	S	G	L	Y	D	Y	T	N	D	M	F	A	Q	T	V	P	G	F	E	S	V	R	N	K	V	F	S	Y	Q	D	L	I	T	L	S	L	K	H	G	V	T	N	A	P	G	A	A	Y	S	Y	S	N	T	N
Template Known Secondary structure		.	.	.	.				S	T	T		S	S		T	T		B						T	T		S					T					T	S	S									T	T														T	S			S	S	S	T	T	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
					133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																																170	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	A	C	V	A	L	A	D	Y	I	A	G	G	Q	R	Q	F	V	E	M	M	N	N	Y	A	E	K	L	H	L	K	D	T	H	F	E	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	L	D	A	P	G	Q	H
Query Conservation		.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																					.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.
Template Sequence		F	V	V	A	G	M	L	I	E	K	L	T	G	H	S	V	A	T	E	Y	Q	N	R	.	.	I	F	T	P	L	N	L	T	D	T	F	Y	V	H	P	D	T	V	I	P	G	T	H	A	N	G	Y	L	T	P	D	E	A	G	G	A	L	V	D	S	T	E	Q	T	V	S	W	A	Q	S	A	G	A	V	I
Template Known Secondary structure														S	S										.	.	T	T	T	T	T	T		T	T		B			T	T						S	S	B								S	S	T	T												T	T	T	G	G	G	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		S	S	A	Y	D	L	A	V	L	S	R	A	I	I	H	G	E	.	.	.	P	E	F	Y	H	M	Y	S	E	K	S	L	T	W	N	G	I	T	Q	Q	N	R	N	G	L	L	W	D	K	T	M	N	V	D	G	L	K	T	G	H	T	S	G	A	G	F	N	L	I	A	S	A	V	D	G	Q	R	R	L	I
Query Conservation																			.	.	.
Alig confidence																			.	.	.																																										.	.
Template Conservation																																																															.	.
Template Sequence		S	S	T	Q	D	L	D	T	F	F	S	A	L	M	S	G	Q	L	M	S	A	A	Q	L	A	Q	M	Q	Q	W	T	T	V	N	S	T	Q	G	Y	G	L	G	L	R	R	R	D	L	S	C	G	I	S	V	Y	G	H	T	G	T	V	.	.	Q	G	Y	Y	T	Y	A	F	A	S	K	D	G	K	R	S	V
Template Known Secondary structure																T	T		S	S									T							T	T					S	S							T	T	S											.	.	T	T									T	T	S	S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	M	G	A	D	S	A	K	G	R	E	E	E	A	R	K	L	L	R	W	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	L	A	N	T	S	N	N	V	N	V	L	N	T	M	A	R	T	L	E	S	A	F
Template Known Secondary structure						S			S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions