 |
Job Description | P33013 | Confidence | 99.16% | Date | Thu Jan 5 11:50:49 GMT 2012 |
Rank | 58 | Aligned Residues | 75 |
% Identity | 19% | Template | d1xp4a1 |
SCOP info | Penicillin-binding protein associated domain
| Penicillin-binding protein associated domain
| PBP5 C-terminal domain-like
|
Resolution | 2.80 |
|
 |
  |   |
283 | . | . | . | . | . | . | 290 | . | . | . | . | . | |
|
. | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  | . | . |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | T | V | Q | I | L | H | R | G | K | K | V | G | . |
. |
T | E | R | I | W | Y | G | D | K | E | N | I | D | L | G | T | E | Q | E | F | W | M | V | L | P | K | A | E | I | P | H | I | K | A | K | Y | T | L | D | G | K | E | L | T | A | P | I | S | A | H | Q | R | V | G | E | I | E | L | Y | D | R | D |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |
|   | . | . |   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |
|
|
|   |
|   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |
|
|   |   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|   |
|   |   |   |
|   |
|
Template Sequence |   |
T | L | R | K | I | V | Q | Q | G | D | A | Y | Q | D | S | K | A | P | V | Q | D | G | K | E | D | T | V | I | A | V | A | P | E | D | I | Y | L | I | E | R | V | G | N | Q | S | S | Q | S | V | Q | F | T | P | D | S | K | A | I | P | A | P | L | E | A | G | T | V | V | G | H | L | T | Y | E | D | K | D |
Template Known Secondary structure |   |
|  |  |  |  |  |
| T | T |
|
| S | S | S |
| B |
|
| B | S | S | S | S |
| S |
|
| B |
|
|
| S | S |
|  |  |  |  |
|
| S | S |
| S | S |
|
|
|
|
|
|
|
| B | S | S | S | B |
| S |
|
|
| T | T | S |
|
| B |  |  |  |
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
294 | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|