Job Description P33013 Confidence 99.59% Date Thu Jan 5 11:50:49 GMT 2012 Rank 49 Aligned Residues 199 % Identity 15% Template d1xa1a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.80

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		S	W	V	L	M	D	Y	T	T	G	Q	I	L	T	A	G	N	.	.	.	E	H	Q	Q	R	N	P	A	S	L	T	K	L	M	T	G	Y	V	V	D	R	A	I	D	S	H	R	I	T	P	D	D	I	V	T	V	G	R	D	A	W	A	K	D	N	P	V	F	V	G	S	S	L	M	F	L	K	E	G	D
Query Conservation																			.	.	.
Alig confidence															.				.	.	.																						.	.	.																													.	.	.	.	.	.	.	.
Template Conservation															.																												.	.	.																													.	.	.	.	.	.	.	.
Template Sequence		S	F	V	M	Y	S	M	K	K	D	K	Y	Y	.	I	Y	N	E	K	E	S	R	K	R	Y	S	P	N	S	T	Y	K	I	Y	L	A	M	F	G	L	D	.	.	.	R	H	I	I	N	D	E	N	S	R	M	S	W	N	H	K	H	Y	P	F	D	A	W	N	K	E	Q	D	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	T	T				.			S					T						G	G	G	G											.	.	.	T	T	S	S		S	S				B				S				S	S	G	G	G	S	S		B		.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.																												.	.	.																													.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		R	V	S	V	R	D	L	S	R	G	L	I	V	D	S	G	N	D	A	C	V	A	L	A	D	Y	I	A	G	G	Q	R	Q	F	V	E	M	M	N	N	Y	A	E	K	L	H	L	K	D	T	H	F	E	T	V	.	H	G	L	D	A	P	G	Q	H	S	S	A	Y	D	L	A	V	L	S	R	A	I	I	H
Query Conservation																																																									.
Alig confidence		.	.	.	.	.	.	.																						.	.	.	.	.	.																						.
Template Conservation		.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	N	T	A	M	Q	N	S	V	N	W	Y	F	E	R	I	S	D	Q	I	P	.	.	.	.	.	.	K	N	Y	T	A	T	Q	L	K	Q	L	N	Y	G	N	K	N	L	G	S	Y	K	S	Y	W	M	E	D	S	L	K	I	S	N	L	E	Q	V	I	V	F	K	N	M	M	E
Template Known Secondary structure		.	.	.	.	.	.	.								T											T	S		.	.	.	.	.	.												T		T	T				T	T	S	S	S	T	T	S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
									100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		194			.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.
Predicted Secondary structure			.	.											.	.																																							.	.	.	.																		.	.	.
Query SS confidence			.	.											.	.																																							.	.	.	.																		.	.	.
Query Sequence		G	.	.	E	P	E	F	Y	H	M	Y	S	E	.	.	K	S	L	T	W	N	G	I	T	Q	Q	N	R	N	G	L	L	W	D	K	T	M	N	V	D	G	L	K	T	G	H	T	S	G	A	G	F	N	.	.	.	.	L	I	A	S	A	V	D	G	Q	R	R	L	I	A	V	V	M	.	.	.	G	A	D
Query Conservation			.	.											.	.																																							.	.	.	.																		.	.	.
Alig confidence			.	.											.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.																		.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	H	F	S	K	K	A	K	N	Q	L	S	S	S	L	L	I	K	K	N	E	K	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	G	K	T	G	T	G	I	V	N	G	K	Y	N	N	G	W	F	V	G	Y	V	I	T	N	H	D	K	Y	Y	F	A	T	H	L	S	D	G	K	P
Template Known Secondary structure				S																		S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T														S	S												S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	K	G	R	E	E	E	A	R	K	L	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	K	N	A	E	L	I	S	E	K	I	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions