Job Description P33013 Confidence 99.92% Date Thu Jan 5 11:50:49 GMT 2012 Rank 44 Aligned Residues 241 % Identity 23% Template d1w79a1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like Dac-like Resolution 1.8

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	W	V	L	M	D	Y	T	T	G	Q	I	L	T	A	G	N	E	H	Q	Q	R	N	P	A	S	L	T	K	L	M	T	G	Y	V	V	D	R	A	I	D	S	H	R	I	T	P	D	D	I	V	T	V	G	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.
Template Sequence		G	V	V	V	V	D	T	A	T	G	E	E	L	Y	S	R	D	G	G	E	Q	L	L	P	A	S	N	M	K	L	F	T	A	A	A	A	L	E	V	L	G	A	.	D	H	S	F	G	T	E	V	A	A	E	S	A	P	G	R	R	G	E	V	Q	D	L	Y	L	V	G	R	G	D	P	T	L	S	A	E	D
Template Known Secondary structure								T	T	T								S	T	T			B			G	G	G													T		T	.	T										S	S				T	T	S			S								S		T	T
Template Predicted Secondary structure																																												.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	A	M	A	A	E	V	A	A	S	G	V	R	T	V	R	G	D	L	Y	A	D	D	T	W	F	D	S	E	R	L	V	D	D	W	W	P	E	D	E	P	Y	A	Y	S	A	Q	I	S	A	L	T	V	A	H	G	E	R	F	D	T	G	V	T	E	V	S	V	T	P	A	A	E	G	E	P	A	D	V
Template Known Secondary structure												T	T						S							T	T	S		S			S		T	T	S		G	G	G	T	T	B	G	G	G					S	S					T	T	T	T			S										S	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	G	A	A	E	G	Y	A	E	L	D	N	R	A	V	T	G	A	A	G	S	A	N	T	L	V	I	D	R	P	V	G	T	N	T	I	A	V	T	G	S	L	P	A	D	A	A	P	V	T	A	L	R	T	V	D	E	P	A	A	L	A	G	H	L	F	E	E	A	L	E	S	N	G	V	T	V	K	G
Template Known Secondary structure				G	G	G	T	T	T	S											T	T											T	T								S				T	T	S										S																	T	T					S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.																				.	.
Query SS confidence																																																			.	.	.	.	.	.																				.	.
Query Sequence		A	W	A	K	D	N	P	V	F	V	G	S	S	L	M	F	L	K	E	G	D	R	V	S	V	R	D	L	S	R	G	L	I	V	D	S	G	N	D	A	C	V	A	L	A	D	Y	I	A	.	.	.	.	.	.	G	G	Q	R	Q	F	V	E	M	M	N	N	Y	A	E	K	L	H	L	.	.	K	D	T	H
Query Conservation																																																			.	.	.	.	.	.																				.	.
Alig confidence																																																			.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		D	V	G	L	G	G	V	P	A	D	W	Q	D	A	E	V	L	A	D	H	T	S	A	E	L	S	E	I	L	V	P	F	M	K	F	S	N	N	G	H	A	E	M	L	V	K	S	I	G	Q	E	T	A	G	A	G	T	W	D	A	G	L	V	G	V	E	E	A	L	S	G	L	G	V	D	T	A	G	L	V
Template Known Secondary structure										S			T	T																							T																		S			S															T	T				T	T		B
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		F	E	T	V	H	G	L	D	A	P	G	Q	H	S	S	A	Y	D	L	A	V	L	S	R	A	I	I	H	G	E	P	E	F	Y	H	M	Y	S	E	K	S	L	T	W	N	G	.	.	.	I	T	Q	Q	N	R	N	G	L	L	W	D	K	T	M	N	V	D	G	L	K	T	G	H	T	S	G	A	G	F	N
Query Conservation																																																.	.	.
Alig confidence											.																				.																	.	.	.																													.
Template Conservation											.																				.																																																.
Template Sequence		L	N	D	G	S	G	L	S	R	.	G	N	L	V	T	A	D	T	V	V	D	L	L	G	Q	A	G	S	A	.	P	W	A	Q	T	W	S	A	S	L	P	V	A	G	E	S	D	P	F	V	G	G	T	L	A	N	R	M	R	G	T	A	A	E	G	V	V	E	A	K	T	G	T	M	S	G	V	.	S	A
Template Known Secondary structure			S		S	S	S		S	T	.	T		B	B														T	S	.	T	T								S		B	T	T		S	S					G	G	G	T	T	S	S	T	T	S	T	T	T	T	T									T	T		.
Template Predicted Secondary structure											.																				.																																																.
Template SS confidence
		343	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.		.	.
		243	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		L	I	A	S	A	V	.	D	G	Q	R	R	L	I	A	V	V	M	G	A	D	S	A	K	G	R	E	E	E	A	R	K	L	L	R	W	G	Q	Q	N	F
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		L	S	G	Y	V	P	G	P	E	G	E	L	A	F	S	I	V	N	N	G	H	S	G	P	A	P	L	A	V	Q	D	A	I	A	V	R	L	A	E	Y	A
Template Known Secondary structure									T	T													S	S	S																	T
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions