Job Description P33013 Confidence 99.62% Date Thu Jan 5 11:50:49 GMT 2012 Rank 48 Aligned Residues 203 % Identity 17% Template d1nrfa_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.50

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		S	W	V	L	M	D	Y	T	T	G	Q	I	L	T	A	G	N	.	.	.	E	H	Q	Q	R	N	P	A	S	L	T	K	L	M	T	G	Y	V	V	D	R	A	I	D	S	H	R	I	T	P	D	D	I	V	T	V	G	R	D	A	W	A	K	D	N	P	V	F	V	G	S	S	L	M	F	L	K	E	G	D
Query Conservation																			.	.	.
Alig confidence															.				.	.	.																						.	.	.																													.	.	.	.	.	.	.	.
Template Conservation															.																												.	.	.																													.	.	.	.	.	.	.	.
Template Sequence		G	F	V	L	F	N	S	N	R	K	K	Y	T	.	I	Y	N	R	K	E	S	T	S	R	F	A	P	A	S	T	Y	K	V	F	S	A	L	L	A	L	E	.	.	.	S	G	I	I	T	K	N	D	S	H	M	T	W	D	G	T	Q	Y	P	Y	K	E	W	N	Q	D	Q	D	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	T	T				.									S		B			G	G	G	G											.	.	.		T	S	S		S	S				B								S	S	T	T	T	S	S		B		.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.																												.	.	.																													.	.	.	.	.	.	.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.				.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		R	V	S	V	R	D	L	S	R	G	L	I	V	D	S	G	N	D	A	C	V	A	L	A	D	Y	I	A	G	G	Q	R	Q	F	V	E	M	M	N	N	Y	A	E	K	L	H	L	K	D	T	H	F	E	T	V	H	G	L	D	A	P	G	.	Q	H	S	S	A	Y	D	L	A	V	L	S	R	A	I	I	H
Query Conservation																																																																.
Alig confidence		.	.	.	.	.	.	.																						.	.	.	.	.	.																													.
Template Conservation		.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	F	S	A	M	S	S	S	T	T	W	Y	F	Q	K	L	D	R	Q	I	G	.	.	.	.	.	.	E	D	H	L	R	H	Y	L	K	S	I	H	Y	G	N	E	D	F	S	V	P	A	D	Y	W	L	D	G	S	L	Q	I	S	P	L	E	Q	V	N	I	L	K	K	F	Y	D
Template Known Secondary structure		.	.	.	.	.	.	.								T														.	.	.	.	.	.											T	T		T	T				S		T	T	T	T	T	T	S	S	S	S		B
Template Predicted Secondary structure		.	.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
									443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.							.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
		194					.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure			.	.	.	.											.	.																																							.	.	.	.
Query SS confidence			.	.	.	.											.	.																																							.	.	.	.
Query Sequence		G	.	.	.	.	E	P	E	F	Y	H	M	Y	S	E	.	.	K	S	L	T	W	N	G	I	T	Q	Q	N	R	N	G	L	L	W	D	K	T	M	N	V	D	G	L	K	T	G	H	T	S	G	A	G	F	N	.	.	.	.	L	I	A	S	A	V	D	G	Q	R	R	L	I	A	V	V	M	G	A	D	S
Query Conservation			.	.	.	.											.	.																																							.	.	.	.
Alig confidence			.	.	.	.											.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	F	D	F	K	Q	S	N	I	E	T	V	K	D	S	I	R	L	E	E	S	N	G	R	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	K	T	G	T	S	V	I	N	G	E	L	H	A	G	W	F	I	G	Y	V	E	T	A	D	N	T	F	F	F	A	V	H	I	Q	G	E
Template Known Secondary structure		T	T	T																				T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S	S													S	S												S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.																.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	G	R	E	E	E	A	R	K	L	L	R	W	G	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	A	A	G	S	S	A	A	E	I	A	L	S	I	L	D
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		575	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions