Job Description P33013 Confidence 98.97% Date Thu Jan 5 11:50:49 GMT 2012 Rank 68 Aligned Residues 201 % Identity 15% Template d1m6ka_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		S	W	V	L	M	D	Y	T	T	G	Q	I	L	T	A	G	N	E	H	Q	Q	.	.	.	R	N	P	A	S	L	T	K	L	M	T	G	Y	V	V	D	R	A	I	D	S	H	R	I	T	P	D	D	I	V	T	V	G	R	D	A	W	A	K	D	N	P	V	F	V	G	S	S	L	M	F	L	K	E	G	D
Query Conservation																							.	.	.
Alig confidence																							.	.	.															.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	F	L	L	Y	D	A	S	T	N	A	E	I	A	Q	F	N	K	A	K	C	A	T	Q	M	A	P	D	S	T	F	I	A	L	S	L	M	A	.	.	.	.	F	D	A	E	I	I	D	Q	K	T	I	F	K	W	D	K	T	P	K	G	M	E	I	W	N	S	N	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	T													T			B			G	G	G									.	.	.	.			T	T	S			T	T			B				S	S			S	S	G	G	G	S	S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.								.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.
Query Sequence		R	V	S	V	R	D	L	S	R	G	L	I	V	D	S	G	N	D	A	C	V	A	L	A	D	Y	I	A	G	G	Q	R	Q	F	V	E	M	M	N	N	Y	A	E	K	L	H	L	K	D	T	H	F	E	T	V	H	G	L	D	.	.	.	.	.	.	.	A	P	G	Q	H	S	S	A	Y	D	L	A	V	L
Query Conservation																																																													.	.	.	.	.	.	.
Alig confidence		.								.	.	.	.																	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation		.								.	.	.	.																	.	.	.	.	.	.
Template Sequence		.	H	T	P	K	T	W	M	.	.	.	.	Q	F	S	V	V	W	V	S	Q	E	I	T	Q	K	I	G	.	.	.	.	.	.	L	N	K	I	K	N	Y	L	K	D	F	D	Y	G	N	Q	D	F	S	G	D	E	R	N	N	G	L	T	E	A	W	L	E	S	S	L	K	I	S	P	E	E	Q	I	Q	F
Template Known Secondary structure		.	B							.	.	.	.		T	T														.	.	.	.	.	.												T		T	T															T	T	S	S	S	S			B
Template Predicted Secondary structure		.								.	.	.	.																	.	.	.	.	.	.
Template SS confidence
			106	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		188	.	190	.	.	.	.	.	.									.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.						.	.	.	.	.	.	.		.	250	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.																																														.	.	.	.	.								.
Query SS confidence											.	.	.	.	.	.	.	.																																														.	.	.	.	.								.
Query Sequence		S	R	A	I	I	H	G	E	P	.	.	.	.	.	.	.	.	E	F	Y	H	M	Y	S	E	K	S	L	T	W	N	G	I	T	Q	Q	N	R	N	G	L	L	W	D	K	T	M	N	V	D	G	L	K	T	G	H	T	S	G	A	G	F	.	.	.	.	.	N	L	I	A	S	A	V	.	D	G	Q	R	R
Query Conservation											.	.	.	.	.	.	.	.																																														.	.	.	.	.								.
Alig confidence											.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.								.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	K	I	I	N	H	N	L	P	V	K	N	S	A	I	E	N	T	I	E	N	M	Y	L	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	N	S	T	K	L	Y	G	K	T	G	A	G	F	T	A	N	R	T	L	Q	N	G	W	F	E	G	F	I	I	S	K	S	G	H	K
Template Known Secondary structure							T	T		S	S	S											T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S													T	T	S	S													T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.																	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		254	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		L	I	A	V	V	M	.	.	.	G	A	D	S	A	K	G	R	E	E	E	A	R	K	L	L	R	W	G	Q	Q
Query Conservation								.	.	.
Alig confidence								.	.	.
Template Conservation
Template Sequence		Y	V	F	V	S	A	L	T	G	N	L	G	S	N	L	T	S	S	I	K	A	K	K	N	A	I	T	I	L	N
Template Known Secondary structure														S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions