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Job DescriptionP33013
Confidence100.00%DateThu Jan 5 11:50:49 GMT 2012
Rank15Aligned Residues233
% Identity15%Templated1m40a_
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution0.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  SWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVS
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Template Sequence  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQND. . . . . . LVEYSPVTEKHLTDGMT
Template Known Secondary structure  TTT

STTS

GGGTTS

TT



GGG......

S

TTGGG
TTT
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   45....50.........60.........70.........80.........90.........100. ........110........
 
   118.120.........130.........140.........150.........160...... ...170.........180.........190.
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Query Sequence  VRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHF. . . . . . ETVHGLDAPGQHSSAYDLAVLSRAI
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Template Sequence  VRELCSAAITMSDNTAANLLLTTIGG. . . . . PKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPAAMATTLRKL
Template Known Secondary structure  S

TS.....TT
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TTGGG


TT

TT
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   119120.........130.........140.... .....150.........160.........170.........180.........190...
 
   192.......200.........210.........220....... ..230.........240.........250......... 260......
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Query Sequence  IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMN. VDGLKTGHTSGAGFNLIASAVDGQRRLIAVVM. . . . GADSAKG
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Template Sequence  LTG. ELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDE
Template Known Secondary structure  S.TTS


SS
TTTGGGG

TT

STT
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S



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   194.. ...200.........210.........220.........230.........240.........250.........260.........270..
 
   267..270.........280..
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Query Sequence  REEEARKLLRWGQQNF
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Template Conservation      
  
   
    
Template Sequence  RNRQIAEIGASLIKHW
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   275....280.........290
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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