Job Description P33013 Confidence 99.25% Date Thu Jan 5 11:50:49 GMT 2012 Rank 55 Aligned Residues 203 % Identity 13% Template d1k55a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.39

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		S	W	V	L	M	D	Y	T	T	G	Q	I	L	T	A	G	N	.	.	.	E	H	Q	Q	R	N	P	A	S	L	T	K	L	M	T	G	Y	V	V	D	R	A	I	D	S	H	R	I	T	P	D	D	I	V	T	V	G	R	D	A	W	A	K	D	N	P	V	F	V	G	S	S	L	M	F	L	K	E	G	D
Query Conservation																			.	.	.
Alig confidence															.				.	.	.																		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.																								.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	V	L	C	K	S	S	S	K	S	C	A	.	T	N	D	L	A	R	A	S	K	E	Y	L	P	A	S	T	F	I	P	N	A	I	I	.	.	.	.	G	L	E	T	G	V	I	K	N	E	H	Q	V	F	.	.	.	.	.	.	.	.	.	.	.	K	W	D	G	K	P	R	A	M	K	Q	W	E	R
Template Known Secondary structure								S	S	T	T	S			.		S						T			B			G	G	G								.	.	.	.				T	T	S	S		S	T	T				.	.	.	.	.	.	.	.	.	.	.				S				S	S	G	G	G	S	S
Template Predicted Secondary structure															.																								.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.												90	.	.	.	.	.	.	.	.	.	100	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		R	V	S	V	R	D	L	S	R	G	L	I	V	D	S	G	N	D	A	C	V	A	L	A	D	Y	I	A	G	G	Q	R	Q	F	V	E	M	M	N	N	Y	A	E	K	L	H	L	K	D	T	H	F	E	T	V	H	G	L	D	A	.	.	P	G	Q	H	S	S	A	Y	D	L	A	V	L	S	R	A	I	I
Query Conservation																																																														.	.
Alig confidence									.	.	.	.																		.	.	.	.	.	.																											.	.
Template Conservation									.	.	.	.																		.	.	.	.	.	.
Template Sequence		D	L	T	L	R	G	A	.	.	.	.	I	Q	V	S	A	V	P	V	F	Q	Q	I	A	R	E	V	G	.	.	.	.	.	.	E	V	R	M	Q	K	Y	L	K	K	F	S	Y	G	N	Q	N	I	S	G	G	I	D	K	F	W	L	E	G	Q	L	R	I	S	A	V	N	Q	V	E	F	L	E	S	L	Y
Template Known Secondary structure									.	.	.	.			T	T														.	.	.	.	.	.											T	T		T	T					S		T	T	T	T	T	T	T	S	S			B
Template Predicted Secondary structure									.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		193	.					.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.							.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure				.	.	.	.											.	.																																							.	.	.	.	.	.
Query SS confidence				.	.	.	.											.	.																																							.	.	.	.	.	.
Query Sequence		H	G	.	.	.	.	E	P	E	F	Y	H	M	Y	S	E	.	.	K	S	L	T	W	N	G	I	T	Q	Q	N	R	N	G	L	L	W	D	K	T	M	N	V	D	G	L	K	T	G	H	T	S	G	A	G	F	N	.	.	.	.	.	.	L	I	A	S	A	V	D	G	Q	R	R	L	I	A	V	V	M	G
Query Conservation				.	.	.	.											.	.																																							.	.	.	.	.	.
Alig confidence				.	.	.	.											.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	K	L	S	A	S	K	E	N	Q	L	I	V	K	E	A	L	V	T	E	A	A	P	E	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	S	K	T	G	F	S	G	V	G	T	E	S	N	P	G	V	A	W	W	V	G	W	V	E	K	E	T	E	V	Y	F	F	A	F	N	M
Template Known Secondary structure		T	T		S	S	S												T						T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S	S	S													T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	S	A	K	G	R	E	E	E	A	R	K	L	L	R	W	G	Q	Q	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	D	N	E	S	K	L	P	L	R	K	S	I	P	T	K	I	M	E	S
Template Known Secondary structure				S		G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions