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Job DescriptionP33013
Confidence99.97%DateThu Jan 5 11:50:49 GMT 2012
Rank39Aligned Residues230
% Identity14%Templated1djaa_
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  SWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVS
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Template Sequence  GVYALDTKSGKEV. KFNSDKRFAYASTSHAINSAILLEQVPYNK. . LNKKVHINKDD. . . . . . IVAYSPILEKYVGKDIT
Template Known Secondary structure  TTT

.STTS

GGGTSS
GGG..TT


GGG......

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TTGGGGTTS
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   45....50....... ..60.........70.........80....... ..90........ .100.........110.....
 
   118.120.........130.........140.........150.........160....... ..170.........180.........190.
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Query Sequence  VRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFE. . . . . . TVHGLDAPGQHSSAYDLAVLSRAI
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Template Sequence  LKALIEASMTYSDNTANNKIIKEIGG. . . . . IKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKL
Template Known Secondary structure  S

T
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S





TTGGG


TT

TT
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   119120.........130.........140.... .....150.........160.........170.........180.........190...
 
   192.......200.........210.........220........ .230.........240 ....... ..250.........260.....
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Query Sequence  IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNV. DGLKTGHTSGAG. FNLIASA. . VDGQRRLIAVVMGADSAK. .
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Template Sequence  IAN. GKLSKENKKFLLDLMLNNKSGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVIFTNKDNKSD
Template Known Secondary structure  TTS.SS


STTTTTS
TT

SSTT

TT

S

SSTT
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   194.. ...200.........210.........220.........230.........240.........250.........260.........270..
 
   266...270.........280..
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Query Sequence  . GREEEARKLLRWGQQNF
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Template Sequence  KPNDKLISETAKSVMKEF
Template Known Secondary structure 


TTT
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   273......280.........290
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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