Job Description P33013 Confidence 98.61% Date Thu Jan 5 11:50:49 GMT 2012 Rank 86 Aligned Residues 138 % Identity 17% Template c3udiA_ PDB info PDB header:penicillin-binding protein/antibiotic Chain: A: PDB Molecule:penicillin-binding protein 1a; PDBTitle: crystal structure of acinetobacter baumannii pbp1a in complex with2 penicillin g Resolution 2.60 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.													.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	W	V	L	M	D	Y	T	T	G	Q	I	L	T	A	G	N	E	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	Q	R	N	P	A	S	L	T	K	L	M	T	G	Y	V	V	D	R	A	I	D	S	H	R	I	T	P	D	D	I	V	T	V	G	R	D	A	W	A	K	D	N	P	V	F	V	G	S
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.		.
Template Conservation																																																					.	.	.		.
Template Sequence		Q	L	I	A	I	N	P	N	D	G	S	I	E	A	I	V	G	G	Y	N	F	Y	Q	S	K	F	N	R	A	L	Q	G	W	R	Q	P	G	S	T	I	K	P	F	L	Y	A	L	A	L	E	R	.	.	.	G	.	M	T	P	Y	S	M	V	N	D	S	P	I	T	I	G	K	W	T	P	K	N	S	D	G
Template Known Secondary structure								T	T	T		B							S	S		T	T	T											B			G	G	G	G											T	.	.	.	T	.			T	T	S									T	T	T						T	T	S
Template Predicted Secondary structure																																																					.	.	.		.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.				.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	M	F	L	K	E	G	D	R	V	S	V	R	D	L	S	R	G	L	I	V	D	S	G	N	D	A	C	V	A	L	A	D	Y	I	A	G	G	Q	R	Q	F	V	E	M	M	N	N	Y	A	E	K	L	H	L	K	D	T	H	F	E	T	V	H	G	L	D	A	P	G	Q	H	S	S	A	Y	D	L	A
Query Conservation
Alig confidence						.	.	.	.	.								.	.	.	.																		.	.	.	.	.	.
Template Conservation						.	.	.	.	.								.	.	.	.																		.	.	.	.	.	.
Template Sequence		R	Y	L	G	.	.	.	.	.	M	I	P	L	R	R	A	.	.	.	.	L	Y	L	S	R	N	T	V	S	V	R	L	L	Q	T	V	G	.	.	.	.	.	.	I	E	R	T	R	Q	L	F	M	D	F	G	L	Q	E	D	Q	I	P	R	N	Y	T	I	A	L	G	T	P	Q	V	L	P	I	Q	M	A
Template Known Secondary structure						.	.	.	.	.								.	.	.	.			T	T														.	.	.	.	.	.										T	T	T			G	G	G	S		S	S	G	G	G	G	G	T		S		B
Template Predicted Secondary structure						.	.	.	.	.								.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		473	.	.	.						.	.	.	480	.	.	.					.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500							.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	S	R	A	I	I	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	Y	A	T	F	A	N	G
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		538	.	540	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions