Job Description P33013 Confidence 98.86% Date Thu Jan 5 11:50:49 GMT 2012 Rank 74 Aligned Residues 232 % Identity 19% Template c3o3vB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of clbp peptidase domain Resolution 2.40 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.												.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	H	A	G	S	W	V	L	M	D	Y	T	T	G	Q	I	L	T	A	G	.	.	.	.	.	.	.	.	.	.	.	N	E	H	Q	Q	R	N	P	A	S	L	T	K	L	M	T	G	Y	V	V	D	R	A	I	D	S	H	R	I	T	P	D	D	I	V	T	V	G	R	D	A	W	A	K	D	N	P	V
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.							.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation																.																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	P	A	L	S	V	S	V	T	I	K	G	V	.	R	Q	R	F	V	Y	G	V	A	D	V	A	S	Q	K	A	N	T	L	D	T	V	Y	E	L	G	S	M	S	K	A	F	T	G	L	V	V	Q	I	L	I	Q	E	G	R	L	R	Q	G	D	D	I	.	.	.	.	.	.	.	.	.	.	I	T	Y
Template Known Secondary structure		T		S									T	T		.											T	T	T	T					T	T		B				G	G	G	G														T	T	S			T	T	S	B		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																																					.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.		.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.							.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.							.
Query Sequence		F	V	G	S	S	L	M	F	L	K	E	G	D	R	V	S	V	R	D	L	S	R	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	D	S	G	N	D	A	C	V	.	.	A	L	A	D	Y	I	.	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.							.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.							.
Template Conservation
Template Sequence		L	P	E	M	R	L	N	Y	Q	G	K	P	A	S	L	T	V	A	D	F	L	Y	H	T	S	G	L	P	F	S	T	L	A	R	L	E	N	P	M	P	G	S	A	V	A	Q	Q	L	R	N	E	N	L	L	F	A	P	G	A	K	F	S	Y	A	S	A	N	Y	D	V	L	G	A	V	I	E	N	V	T	G
Template Known Secondary structure			T	T						T	T						B						T	T		S				T								S			S	S							S	T	T				S	S		T	T	S						T	T														S
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.																												.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	Q	R	Q	F	V	E	M	M	N	N	Y	A	E	K	L	H	L	K	D	T	H	F	E	T	V	H	G	L	D	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	H	S	S	A	Y	D	L	A	V	L	S	R	A	I	I	H	G	E
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		K	T	F	T	E	V	I	A	E	R	.	.	L	T	Q	P	L	G	M	S	A	T	V	A	V	K	G	D	E	I	I	V	N	K	A	S	G	Y	K	L	G	F	G	K	P	V	L	F	H	A	P	L	A	R	N	H	V	P	A	A	Y	I	H	S	T	L	P	D	M	E	I	W	I	D	A	W	L	H	R	K
Template Known Secondary structure		S										.	.	T					T		S	S						S	S				T	T	B				B			S	S	S			B				S				S	T	T					T																	T	G	G
Template Predicted Secondary structure												.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
					196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																																.	.	.
Query SS confidence		.	.	.																																																.	.	.
Query Sequence		.	.	.	P	E	F	Y	H	M	Y	S	E	K	S	L	T	W	N	G	I	T	Q	Q	N	R	N	G	L	L	W	D	K	T	M	N	V	D	G	L	K	T	G	H	T	S	G	A	G	F	N	.	.	.	L	I	A	S	A	V	D	G	Q	R	R	L	I	A	V	V	M	G	A	D	S	A	K	G	R	E	E
Query Conservation		.	.	.																																																.	.	.
Alig confidence		.	.	.																																																.	.	.
Template Conservation
Template Sequence		A	L	P	A	T	L	R	E	A	M	S	N	S	W	R	G	N	S	D	V	P	L	A	A	D	N	R	I	L	Y	A	S	G	W	F	I	D	Q	N	Q	G	P	Y	I	S	H	G	G	Q	N	P	N	F	S	S	C	I	A	L	R	P	D	Q	Q	I	G	I	V	A	L	A	N	M	N	S	N	L	I	L	Q
Template Known Secondary structure		G	S												T					S	S				S	S							S	S						T	T	S										S	S									G	G	G	T								S	B
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	R	K	L	L	R	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	C	A	D	I	D	N	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions