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Job DescriptionP33013
Confidence99.98%DateThu Jan 5 11:50:49 GMT 2012
Rank35Aligned Residues232
% Identity14%Templatec3lezA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of a halotolerant bacterial beta-lactamase
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  SWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVS
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Template Sequence  GVYAIDTGADKEI. SYRENERFAYTSTFKPLAVGAVLQTKSDE. . ELEETITYSEED. . . . . . LVTYSPITEQHVDEGMT
Template Known Secondary structure  TTTT.STTS
GGGG

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   61........70... ......80.........90.........100.. .......110.... .....120.........130.
 
   118.120.........130.........140.........150.........160....... ..170.........180.........190.
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Query Sequence  VRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFE. . . . . . TVHGLDAPGQHSSAYDLAVLSRAI
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Template Sequence  LVEIADAAIRYSDNTAGNLLLEAMGG. . . . . PDELETILRDIGDETIEMDRYETELNEAKPGDIRDTSTAKAMATTLQQY
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TTS.....TT

S
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TTGGG


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   132.......140.........150....... ..160.........170.........180.........190.........200......
 
   192.......200.........210.........220........ .230.........240.........250... ...... 260.....
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Query Sequence  IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNV. DGLKTGHTSGAGFNLIASAVDGQRR. . LIAVVM. . . GADSAK
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Template Sequence  VLE. DVLDADRREVLTNMLINNTTGDALIRAGVPDGWTVGDKTGAGGYGTRNDIGIIWPEGDEEPIVIAIMSSRDEEDAD
Template Known Secondary structure  TS.SSS
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TTTGGGGS
TT
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   207.. 210.........220.........230.........240.........250.........260.........270.........280.....
 
   266...270.........280....
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Query Sequence  GREEEARKLLRWGQQNFTT
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Template Sequence  YDDKLIEKATEIVLQELRN
Template Known Secondary structure 

TT
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   286...290.........300....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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