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Job DescriptionP33013
Confidence100.00%DateThu Jan 5 11:50:49 GMT 2012
Rank7Aligned Residues324
% Identity24%Templatec3humB_
PDB info PDB header:hydrolase/antibioticsChain: B: PDB Molecule:penicillin-binding protein 4; PDBTitle: crystal structure of penicillin binding protein 4 from2 staphylococcus aureus col in complex with cefotaxime
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAW
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Template Sequence  VTPVQAANQYGYAGLSAAYEPTSAVNVS. QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEY
Template Known Secondary structure  S
TT
TT

GGG

S.TT
BSTT


GGGGTTSS
TT


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Query Sequence  AKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDA.
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Template Sequence  IMSTL. . PELSNTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHFVNPTGAENS
Template Known Secondary structure  TT
..TT






TT
S

SSST
TT
B
SSSS
S
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Query Sequence  . . . . . . . . . . . . . PGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWD. . . KTMNVDGLKTGHTSG
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Template Sequence  RLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAVTYYTFNFSLEGAKMSLPGTDGLKTGSSDT
Template Known Secondary structure  GGGS
GGGTT



B
TTT
SS
TT


S
TTSTTSTT

TTTT
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Query Sequence  AGFNLIASAVDGQRRLIAVVMGADS. . . . . . AKGREEEARKLLRWGQQNFTTVQILHRGKKV. . . GTERIWYGDKENIDL
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Template Sequence  ANYNHTITTKRGKFRINQVIMGAGDYKNLGGEKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVENDLYDVLPS
Template Known Secondary structure  TTTSBTTTTB

STTSS
T
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   266...270.........280.........290.........300.........310.........320.........330.........340.....
 
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Query Sequence  GTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPIS
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Template Sequence  DFSKKDYKLVVEDGKVHADYPREFI. NKDYGPPT
Template Known Secondary structure  T

GGGSTT
S

BS.STT

S
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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