Job Description P33013 Confidence 99.34% Date Thu Jan 5 11:50:49 GMT 2012 Rank 53 Aligned Residues 199 % Identity 16% Template c3hbrD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:oxa-48; PDBTitle: crystal structure of oxa-48 beta-lactamase Resolution 1.90 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		S	W	V	L	M	D	Y	T	T	G	Q	I	L	T	A	G	N	E	H	Q	Q	R	N	P	A	S	L	T	K	L	M	T	G	Y	V	V	D	R	A	I	D	S	H	R	I	T	P	D	D	I	V	T	V	G	R	D	A	W	A	K	D	N	P	V	F	V	G	S	S	L	M	F	L	K	E	G	D	R	.	V
Query Conservation																																																																																.
Alig confidence																																				.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																				.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	V	L	W	N	E	Q	Q	G	F	T	N	N	L	K	R	A	N	Q	A	F	L	P	A	S	T	F	I	P	N	S	L	I	.	.	.	.	A	L	D	L	G	V	V	K	D	E	H	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	F	K	W	D	G	Q	T	R	D	I	A	T	W	N	R	D	H
Template Known Secondary structure														S		T	T	G	G	G						G	G	G								.	.	.	.					T	S	S		S	T	T			.	.	.	.	.	.	.	.	.	.	.	.	B				S				S	S	G	G	G	S	S		B
Template Predicted Secondary structure																																				.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.													90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		S	V	R	D	L	S	R	G	L	I	V	D	S	G	N	D	A	C	V	A	L	A	D	Y	I	A	G	G	Q	R	Q	F	V	E	M	M	N	N	Y	A	E	K	L	H	L	K	D	T	H	F	E	T	V	H	G	L	D	.	.	A	P	G	Q	H	S	S	A	Y	D	L	A	V	L	S	R	A	I	I	H	G
Query Conservation																																																											.	.
Alig confidence						.	.	.	.																			.	.	.	.	.	.																										.	.
Template Conservation						.	.	.	.																			.	.	.	.	.	.
Template Sequence		N	L	I	T	.	.	.	.	A	M	K	Y	S	V	V	P	V	Y	Q	E	F	A	R	Q	I	G	.	.	.	.	.	.	E	A	R	M	S	K	M	L	H	A	F	D	Y	G	N	E	D	I	S	G	N	V	D	S	F	W	L	D	G	G	I	R	I	S	A	T	E	Q	I	S	F	L	R	K	L	Y	H	N
Template Known Secondary structure						.	.	.	.				T	T														.	.	.	.	.	.												T		T	T					S		T	T	T					S	S																	T	T
Template Predicted Secondary structure						.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.							.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
						195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.
Predicted Secondary structure		.	.	.	.																														.	.																				.	.	.																		.	.	.	.
Query SS confidence		.	.	.	.																														.	.																				.	.	.																		.	.	.	.
Query Sequence		.	.	.	.	E	P	E	F	Y	H	M	Y	S	E	K	S	L	T	W	N	G	I	T	Q	Q	N	R	N	G	L	L	W	D	.	.	K	T	M	N	V	D	G	L	K	T	G	H	T	S	G	A	G	F	N	.	.	.	L	I	A	S	A	V	D	G	Q	R	R	L	I	A	V	V	M	.	.	.	.	G	A
Query Conservation		.	.	.	.																														.	.																				.	.	.																		.	.	.	.
Alig confidence		.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.																				.	.	.																		.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	H	V	S	E	R	S	Q	R	I	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	M	L	T	E	A	N	G	D	Y	I	I	R	A	K	T	G	Y	S	T	R	I	E	P	K	I	G	W	W	V	G	W	V	E	L	D	D	N	V	W	F	F	A	M	N	M	D	M	P	T	S
Template Known Secondary structure			S	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T						S	S												S	S	S	S												S	S												S	S	G
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.																.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	A	K	G	R	E	E	E	A	R	K	L	L	R	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	L	G	L	R	Q	A	I	T	K	E	V	L	K	Q
Template Known Secondary structure		G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions