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Job DescriptionP33013
Confidence100.00%DateThu Jan 5 11:50:49 GMT 2012
Rank19Aligned Residues229
% Identity16%Templatec3cg5A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of the covalent adduct formed between tb2 b-lactamase and clavulanate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  SWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVS
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Template Sequence  GVYVPATGTTAAI. EYRADERFAFCSTFKAPLVAAVLHQNPLTH. . LDKLITYTSDD. . . . . . IRSISPVAQQHVQTGMT
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SS


.STTS

GGGGS
GGG..GG



GGG......

S

TTTTT
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   60.........70.. .......80.........90.........100.. .......110... ......120.........130
 
   118.120.........130.........140.........150.........160....... ..170.........180.........190.
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Query Sequence  VRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFE. . . . . . TVHGLDAPGQHSSAYDLAVLSRAI
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Template Sequence  IGQLCDAAIRYSDGTAANLLLADL. GGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAIALVLQQL
Template Known Secondary structure  S

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SGGGGTT

S





TTGGG


TT

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   131........140.........150.... .....160.........170.........180.........190.........200.........
 
   192.......200.........210.........220....... ..230.........240......... 250.........260.......
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Query Sequence  IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMN. VDGLKTGHTSGAGFNLIASAVD. GQRRLIAVVMGADSAKGR. .
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Template Sequence  VLG. NALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGTGDYGRANDIAVVWSPTGVPYVVAVMSDRAGGGYDA
Template Known Secondary structure  TS.SSS
T
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TTTS
TTSTTT
TTS

GGG
TT
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   210.. .......220.........230.........240.........250.........260.........270.........280........
 
   268.270.......
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Query Sequence  . . . . . . . EEEARKLLRW
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Template Sequence  EPREALLAEAATCVAGV
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   289290.........300.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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