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Job DescriptionP33013
Confidence100.00%DateThu Jan 5 11:50:49 GMT 2012
Rank3Aligned Residues341
% Identity50%Templatec3a3jA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pbp5; PDBTitle: crystal structures of penicillin binding protein 5 from2 haemophilus influenzae
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   30.........40.........50.........60.........70.........80.........90.........100.........
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Query Sequence  QPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMF
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Template Sequence  TPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMVTIGESAWGRNFP. . . DSSKMF
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SSTTT

STTS
B

GGGTTSS
TT


TTT
GGG
T...TS



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   32.......40.........50.........60.........70.........80.........90.........100.. ......
 
   110.........120.........130.........140.........150.........160.........170.........180.........
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Query Sequence  LKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSR
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Template Sequence  LDLNTQVSVADLNRGVIVVSGNDATVALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGA
Template Known Secondary structure 

TT


SSTT
SS
B
SSSS



TT
BB
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   109110.........120.........130.........140.........150.........160.........170.........180........
 
   190.........200.........210.........220.........230.........240....... ..250.........260........
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Query Sequence  AIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASA. VDGQRRLIAVVMGADSAKGRE
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Template Sequence  HIIRDLPEEYKIYSEKDFTFNKIKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMRLISVVMGVPTYKGRE
Template Known Secondary structure 
GGGG

TT
S
GGGG
TTSTTT
TT

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   189190.........200.........210.........220.........230.........240.........250.........260........
 
   269270.........280.........290.........300.........310.........320.........330.........340........
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Query Sequence  EEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRV
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Template Sequence  VESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGAFMDHFITIPKGKQSEVKARYELADKNLQAPLAKGQVI
Template Known Secondary structure 
TT
SSSSS
SS
TT
TTT
SSSSS
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TT
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   269270.........280.........290.........300.........310.........320.........330.........340........
 
   349350.........360.........370...
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Query Sequence  GEIELYDRDKQVAHWPLVTLESVGE
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Template Conservation 
   
   
  
  
 
 
   
  
Template Sequence  GKVVYALDGKDIASANLQVMNDVGE
Template Known Secondary structure  TT
S
B

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   349350.........360.........370...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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