Job Description P33013 Confidence 100.00% Date Thu Jan 5 11:50:49 GMT 2012 Rank 32 Aligned Residues 229 % Identity 16% Template c2wuqA_ PDB info PDB header:transcription Chain: A: PDB Molecule:beta-lactamase regulatory protein blab; PDBTitle: crystal structure of blab protein from streptomyces cacaoi Resolution 1.80 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	V	L	M	D	Y	T	T	G	Q	I	L	T	A	G	N	E	H	Q	Q	R	N	P	A	S	L	T	K	L	M	T	G	Y	V	V	D	R	A	I	D	S	H	R	I	T	P	D	D	I	V	T	V	G	R	D	A	W	A	K	D	N	P	V	F	V	G	S	S	L	M	F	L	K	E	G	D	R	V	S
Query Conservation
Alig confidence															.																																																.	.	.	.
Template Conservation															.																																																.	.	.	.
Template Sequence		S	F	L	V	R	D	L	Y	T	G	E	E	L	.	G	I	D	P	D	T	E	L	P	T	A	S	L	V	K	L	P	L	A	L	A	T	L	E	R	I	R	L	G	E	V	D	G	A	Q	Q	I	E	V	A	P	G	R	I	T	T	P	.	.	.	.	G	P	T	G	L	S	R	F	R	H	P	A	R	V	A
Template Known Secondary structure								T	T	T					.			S	T	T						G	G	G	G														T	T	S	S		T	T												S	S	.	.	.	.	S			G	G	G	G		S	S
Template Predicted Secondary structure															.																																																.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.								.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																																				.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.
Query Sequence		V	R	D	L	S	R	G	L	I	V	D	S	G	N	D	A	C	V	A	L	A	D	Y	I	A	G	G	Q	R	Q	F	V	E	M	M	N	N	Y	A	E	K	L	H	L	K	D	T	H	F	E	.	.	.	.	.	.	.	T	V	H	G	L	D	A	P	G	Q	H	S	S	A	Y	D	L	A	V	L	S	R	A
Query Conservation																																																				.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		V	D	D	L	L	Y	L	S	T	S	V	S	D	G	T	A	S	D	A	L	F	E	I	T	P	.	.	.	.	.	.	P	A	Q	V	E	Q	M	V	R	E	W	G	F	R	D	L	T	V	R	H	S	M	R	E	H	R	V	P	Q	L	D	V	A	R	A	N	T	G	T	A	R	A	F	V	D	L	L	E	A
Template Known Secondary structure												S													S		.	.	.	.	.	.											T	T			S							T	T				S	G	G	G		T	T	T	S
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.							.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																																																			.
Query SS confidence																					.	.	.	.	.																																																			.
Query Sequence		I	I	H	G	E	P	E	F	Y	H	M	Y	S	E	K	S	L	T	W	.	.	.	.	.	N	G	I	T	Q	Q	N	R	N	G	L	L	W	D	K	T	M	N	V	D	G	L	K	T	G	H	T	S	G	A	G	F	N	L	I	A	S	A	V	D	G	Q	R	R	L	I	A	V	V	M	.	G	A	D	S	A
Query Conservation																					.	.	.	.	.																																																			.
Alig confidence						.															.	.	.	.	.																																																			.
Template Conservation						.
Template Sequence		L	W	A	P	.	V	L	T	G	P	A	L	P	P	E	P	A	A	R	L	R	E	L	M	A	A	N	L	L	R	H	R	L	A	P	D	F	A	S	D	A	A	T	W	S	S	K	T	G	T	L	L	N	L	R	H	E	V	G	V	V	E	H	A	D	G	Q	V	F	A	V	A	V	L	T	E	S	Q	V	P
Template Known Secondary structure				G	G	.	G																				T					S	S	S						B	T	T											T	T											T	T	S												S	S
Template Predicted Secondary structure						.
Template SS confidence
		202	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		265	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	R	E	E	E	A	R	K	L	L	R	W	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	S	Q	P	G	A	E	A	L	M	A	Q	V
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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