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Job DescriptionP33013
Confidence100.00%DateThu Jan 5 11:50:49 GMT 2012
Rank13Aligned Residues233
% Identity16%Templatec2v20A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase tem; PDBTitle: structure of a tem-1 beta-lactamase insertant2 allosterically regulated by kanamycin and anions. complex3 with sulfate.
Resolution1.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  SWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVS
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Template Sequence  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQND. . . . . . LVKYSPVTEKHLTDGMT
Template Known Secondary structure  TTT

STTS

GGGTTS

TT



GGG......

SS
TTGGG
TTT
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   25....30.........40.........50.........60.........70.........80. ........90........
 
   118.120.........130.........140.........150.........160....... ..170.........180.........190.
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Query Sequence  VRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFE. . . . . . TVHGLDAPGQHSSAYDLAVLSRAI
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Template Sequence  VRELCSAAITMSDNTAANLLLTTIGG. . . . . PKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTLRKL
Template Known Secondary structure  S

TS.....TT

S



S
TTGGG


TT

TT
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   99100.........110.........120.... .....130.........140.........150.........160.........170...
 
   192.......200.........210.........220......... 230.........240.........250......... 260......
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Query Sequence  IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVD. GLKTGHTSGAGFNLIASAVDGQRRLIAVVM. . . . GADSAKG
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Template Sequence  LTG. ELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGRRGSRGIIAALGPDGKPSRIVVIYTTGSRKKTDE
Template Known Secondary structure  S.SSS
T

S
TTT

TT

STT
STTS

S

S
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   174.. ...180.........190.........200.........210.........220.........230.........240.........250..
 
   267..270.........280..
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Query Sequence  REEEARKLLRWGQQNF
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Template Sequence  RNRQIAEIGASLIKHW
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   253......260........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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