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Job DescriptionP33013
Confidence99.98%DateThu Jan 5 11:50:49 GMT 2012
Rank33Aligned Residues232
% Identity18%Templatec2qpnA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase ges-1; PDBTitle: ges-1 beta-lactamase
Resolution1.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  SWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVS
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Template Sequence  GVAIVDPQGEIVA. GHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGP. . . . . DMIVEWSPATERFLASGHMT
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GGGGTSS
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   40.........50.. .......60.........70.........80.........90... ......100.........110...
 
   118.120.........130.........140.........150.........160....... ..170.........180.........190.
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Query Sequence  VRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFE. . . . . . TVHGLDAPGQHSSAYDLAVLSRAI
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Template Sequence  VLEAAQAAVQLSDNGATNLLLREIGG. . . . . PAAMTQYFRKIGDSVSRLDRKEPEMGDNTPGDLRDTTTPIAMARTVAKV
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TTGGG


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   114.....120.........130......... 140.........150.........160.........170.........180........
 
   192.......200.........210.........220....... ..230.........240.........250.........260........
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Query Sequence  IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMN. VDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGRE. .
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Template Sequence  LYG. GALTSTSTHTIERWLIGNQTGDATLRAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAVYTTAPKLSAVER
Template Known Secondary structure  TS.SSS
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   189190. ........200.........210.........220.........230.........240.........250.........260.......
 
   269270.........280.
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Query Sequence  . . . . . EEARKLLRWGQQN
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Template Sequence  DELVASVGQVITQLILST
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   268.270.........280.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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