Job Description P33013 Confidence 98.09% Date Thu Jan 5 11:50:49 GMT 2012 Rank 91 Aligned Residues 142 % Identity 21% Template c2olvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:penicillin-binding protein 2; PDBTitle: structural insight into the transglycosylation step of bacterial cell2 wall biosynthesis : donor ligand complex Resolution 2.80 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.													.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	W	V	L	M	D	Y	T	T	G	Q	I	L	T	A	G	N	.	.	.	.	.	.	.	.	.	.	.	.	E	H	Q	Q	R	N	P	A	S	L	T	K	L	M	T	G	Y	V	V	D	R	A	I	D	S	H	R	I	T	P	D	D	I	V	T	V	G	R	D	A	W	A	K	D	N	P	V	F	V	G	S
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.																				.	.															.	.	.	.	.	.	.
Template Conservation																																																		.	.															.	.	.	.	.	.	.
Template Sequence		G	A	T	I	L	D	S	K	T	G	G	L	V	A	I	S	G	G	R	D	F	K	D	V	V	N	R	N	Q	A	T	D	P	H	P	T	G	S	S	L	K	P	F	L	A	Y	G	P	.	.	A	I	E	N	X	K	W	A	T	N	H	A	I	Q	.	.	.	.	.	.	.	D	E	S	S	Y	Q	V	D	G
Template Known Secondary structure								T	T	T		B						S	S	T	T			T	T	T	S			T	T	S	S					G	G	G	G					T				.	.									T	T	B				.	.	.	.	.	.	.			S				S	S	S
Template Predicted Secondary structure																																																		.	.															.	.	.	.	.	.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.			.	410	.	.	.	.	.	.	.	.	.	420	.	.								.	.	.	.	.	.	.	430	.
		106	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure										.	.	.																																																		.
Query SS confidence										.	.	.																																																		.
Query Sequence		S	L	M	F	L	K	E	G	.	.	.	D	R	V	S	V	R	D	L	S	R	G	L	I	V	D	S	G	N	D	A	C	V	A	L	A	D	Y	I	A	G	G	Q	R	Q	F	V	E	M	M	N	N	Y	A	E	K	L	H	L	K	.	D	T	H	F	E	T	V	H	G	L	D	A	P	G	Q	H	S	S	A
Query Conservation										.	.	.																																																		.
Alig confidence										.	.	.										.	.	.	.																	.	.																			.
Template Conservation																						.	.	.	.																	.	.
Template Sequence		S	T	F	R	N	Y	D	T	K	S	H	G	T	V	S	I	Y	D	A	L	.	.	.	.	R	Q	S	F	N	I	P	A	L	K	A	W	Q	S	V	K	.	.	Q	N	A	G	N	D	A	P	K	K	F	A	A	K	L	G	L	N	Y	E	G	D	I	G	P	S	E	V	L	G	G	S	A	S	E	F	S	P
Template Known Secondary structure							S	S		S												.	.	.	.		T	T														.	.			T		T	T								T	T	T				S	S								T	T		T	T
Template Predicted Secondary structure																						.	.	.	.																	.	.
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.					.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.			.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	L	A	V	L	S	R	A	I	I	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	L	A	S	A	F	A	A	I	A	N	G
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		506	.	.	.	510	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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