Job Description P33013 Confidence 99.46% Date Thu Jan 5 11:50:49 GMT 2012 Rank 52 Aligned Residues 196 % Identity 18% Template c2jc7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase oxa-24; PDBTitle: the crystal structure of the carbapenemase oxa-24 reveals2 new insights into the mechanism of carbapenem-hydrolysis Resolution 2.5 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		S	W	V	L	M	D	Y	T	T	G	Q	I	L	T	A	G	N	E	H	.	.	.	Q	Q	R	N	P	A	S	L	T	K	L	M	T	G	Y	V	V	D	R	A	I	D	S	H	R	I	T	P	D	D	I	V	T	V	G	R	D	A	W	A	K	D	N	P	V	F	V	G	S	S	L	M	F	L	K	E	G	D
Query Conservation																					.	.	.
Alig confidence															.						.	.	.																				.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.																												.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	I	I	K	E	G	K	N	L	S	T	Y	.	G	N	A	L	A	R	A	N	K	E	Y	V	P	A	S	T	F	K	M	L	N	A	L	I	G	L	E	.	.	.	N	H	K	A	T	T	N	E	I	F	K	W	D	.	.	.	.	.	.	.	.	.	.	.	.	G	K	K	R	T	Y	P	M	W	E	K
Template Known Secondary structure								T	T						.		S		G	G	G	G	G			B			G	G	G	G											.	.	.	T	T	S			S	S			B				.	.	.	.	.	.	.	.	.	.	.	.	S	S			S	S	G	G	G	S	S
Template Predicted Secondary structure															.																												.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.													.	.	.	110	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																																														.	.	.	.
Query SS confidence																																																														.	.	.	.
Query Sequence		R	V	S	V	R	D	L	S	R	G	L	I	V	D	S	G	N	D	A	C	V	A	L	A	D	Y	I	A	G	G	Q	R	Q	F	V	E	M	M	N	N	Y	A	E	K	L	H	L	K	D	T	H	F	E	T	V	H	G	L	D	A	.	.	.	.	P	G	Q	H	S	S	A	Y	D	L	A	V	L	S	R	A
Query Conservation																																																														.	.	.	.
Alig confidence								.	.	.	.																			.	.	.	.	.	.																	.	.									.	.	.	.
Template Conservation								.	.	.	.																			.	.	.	.	.	.																	.	.
Template Sequence		D	M	T	L	G	E	.	.	.	.	A	M	A	L	S	A	V	P	V	Y	Q	E	L	A	R	R	T	G	.	.	.	.	.	.	L	E	L	M	Q	K	E	V	K	R	V	N	F	G	N	T	.	.	N	I	G	T	Q	V	D	N	F	W	L	V	G	P	L	K	I	T	P	V	Q	E	V	N	F	A	D	D
Template Known Secondary structure			B					.	.	.	.					T														.	.	.	.	.	.												T		T	T		.	.			T	T		T	T	T					S	S			B
Template Predicted Secondary structure								.	.	.	.																			.	.	.	.	.	.																	.	.
Template SS confidence
		118	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.							.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		191	.	.					.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.												.	.																																							.	.	.																		.	.
Query SS confidence					.	.	.	.												.	.																																							.	.	.																		.	.
Query Sequence		I	I	H	.	.	.	.	G	E	P	E	F	Y	H	M	Y	S	E	.	.	K	S	L	T	W	N	G	I	T	Q	Q	N	R	N	G	L	L	W	D	K	T	M	N	V	D	G	L	K	T	G	H	T	S	G	A	G	F	N	.	.	.	L	I	A	S	A	V	D	G	Q	R	R	L	I	A	V	V	M	.	.
Query Conservation					.	.	.	.												.	.																																							.	.	.																		.	.
Alig confidence					.	.	.	.												.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																		.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	H	N	R	L	P	F	K	L	E	T	Q	E	E	V	K	K	M	L	L	I	K	E	V	N	G	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	A	K	S	G	W	G	M	G	V	T	P	Q	V	G	W	L	T	G	W	V	E	Q	A	N	G	K	K	I	P	F	S	L	N	L
Template Known Secondary structure				T	T		S	S	S											T	T						T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S	S	S												T	T	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.																.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
					260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	A	D	S	A	K	G	R	E	E	E	A	R	K	L	L	R
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		E	M	K	E	G	M	S	G	S	I	R	N	E	I	T	Y	K	S	L	E
Template Known Secondary structure					T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions