Job Description P33013 Confidence 98.69% Date Thu Jan 5 11:50:49 GMT 2012 Rank 84 Aligned Residues 131 % Identity 21% Template c1qmfA_ PDB info PDB header:peptidoglycan synthesis Chain: A: PDB Molecule:penicillin-binding protein 2x; PDBTitle: penicillin-binding protein 2x (pbp-2x) acyl-enzyme complex Resolution 2.80 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.																							.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	W	V	L	M	D	Y	T	T	G	Q	I	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	N	E	H	Q	Q	R	N	P	A	S	L	T	K	L	M	T	G	Y	V	V	D	R	A	I	D	S	H	R	I	T	P	D	D	I	V	T	V	G	R	D	A	W
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.												.	.	.	.	.	.
Template Conservation																																																														.	.	.												.	.	.	.	.	.
Template Sequence		T	A	T	L	V	S	A	K	T	G	E	I	L	A	T	T	Q	R	P	T	F	D	A	D	T	K	E	G	I	T	E	D	F	V	W	R	D	I	L	Y	Q	S	N	Y	E	P	G	S	T	M	K	V	M	M	L	A	A	A	I	D	.	.	.	N	N	T	F	P	G	G	E	V	F	N	.	.	.	.	.	.
Template Known Secondary structure								T	T	T		B								S				T	T	T		T	T			T	T						T	T	T	S			B			G	G	G	G											.	.	.	T	T				T	T					.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.												.	.	.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.				350	.	.	.	.	.	.	.	.	.	360
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110								.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.
Query Sequence		A	K	D	N	P	V	F	V	G	S	S	L	M	F	L	.	.	.	.	.	.	.	K	E	G	D	R	V	S	V	R	D	L	S	R	G	L	I	V	D	S	G	N	D	A	C	V	A	L	A	D	Y	I	A	G	G	Q	R	Q	F	V	E	M	M	N	N	Y	A	E	K	L	H	L	K	D	T	H	F	E	T
Query Conservation																	.	.	.	.	.	.	.
Alig confidence		.	.														.	.	.	.	.	.	.												.	.	.	.																		.	.	.	.	.	.																.	.	.	.	.
Template Conservation		.	.																																.	.	.	.																		.	.	.	.	.	.																.	.	.	.	.
Template Sequence		.	.	S	S	E	L	K	I	A	D	A	T	I	R	D	W	D	V	N	E	G	L	T	G	G	R	M	M	T	F	S	Q	G	.	.	.	.	F	A	H	S	S	N	V	G	M	T	L	L	E	Q	K	M	G	.	.	.	.	.	.	D	A	T	W	L	D	Y	L	N	R	F	K	F	G	V	.	.	.	.	.
Template Known Secondary structure		.	.		S				S	S	S										S		T	T		S									.	.	.	.			T	T														.	.	.	.	.	.											T	T	T	T	S	.	.	.	.	.
Template Predicted Secondary structure		.	.																																.	.	.	.																		.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
				361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.					.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.							.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		169	170	.	.	.	.	.																							.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	H	G	L	D	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	H	S	S	A	Y	D	L	A	V	L	S	R	A	I	I	H	G
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	R	F	G	L	T	D	E	Y	A	G	Q	L	P	A	D	N	I	V	N	I	A	Q	S	S	F	G	Q	G	I	S	V	T	Q	T	Q	M	I	R	A	F	T	A	I	A	N	D
Template Known Secondary structure						S	S	S	S					B				S	S	T	T					G	G	G	T		S		B	B														T	T
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions