Job Description P07639 Confidence 100.00% Date Thu Jan 5 11:00:23 GMT 2012 Rank 3 Aligned Residues 336 % Identity 39% Template d1sg6a_ SCOP info Dehydroquinate synthase-like Dehydroquinate synthase-like Dehydroquinate synthase, DHQS Resolution 1.70

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		14	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure													.	.																																							.	.	.	.	.	.
Query SS confidence													.	.																																							.	.	.	.	.	.
Query Sequence		P	I	T	I	A	S	G	L	F	N	E	.	.	P	A	S	F	L	P	L	K	S	G	E	Q	V	M	L	V	T	N	E	T	L	A	P	L	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	.	.	.	.	.	.	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D	T	V	F
Query Conservation													.	.																																							.	.	.	.	.	.
Alig confidence													.	.																																							.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	I	A	D	F	G	L	W	R	N	Y	V	A	K	D	L	I	S	D	C	S	S	T	T	Y	V	L	V	T	D	T	N	I	G	S	I	Y	T	P	S	F	E	E	A	F	R	K	R	A	A	E	I	T	P	S	P	R	L	L	I	Y	N	R	P	P	G	E	V	S	K	S	R	Q	T	K	A	D	I	E
Template Known Secondary structure							T	T					T									S			S																													S	S	S											S	S	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		86	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		T	A	L	L	Q	K	P	H	.	.	G	R	D	T	T	L	V	A	L	G	G	G	V	V	G	D	L	T	G	F	A	A	A	S	Y	Q	R	G	V	R	F	I	Q	V	P	T	T	L	L	S	Q	V	D	S	S	V	G	G	K	T	A	V	N	H	P	L	G	K	N	M	I	G	A	F	Y	Q	P	A	S	V
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		D	W	M	L	S	Q	N	P	P	C	G	R	D	T	V	V	I	A	L	G	G	G	V	I	G	D	L	T	G	F	V	A	S	T	Y	M	R	G	V	R	Y	V	Q	V	P	T	T	L	L	A	M	V	D	S	S	I	G	G	K	T	A	I	D	T	P	L	G	K	N	L	I	G	A	I	W	Q	P	T	K	I
Template Known Secondary structure						T	S	S	S				T	T								S														G	G	G										S						T	T	T	S	S								T	T												S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.										.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.
Query Sequence		V	V	D	L	D	C	L	K	T	L	P	P	R	E	L	A	S	G	L	A	E	V	I	K	Y	G	I	I	L	D	G	A	F	F	N	W	L	E	E	N	L	D	A	L	L	R	L	D	G	P	A	M	A	.	.	.	.	.	.	.	.	.	Y	C	I	R	R	C	C	E	L	K	A	E	V	V	A	A	D	E
Query Conservation																																																							.	.	.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	I	D	L	E	F	L	E	T	L	P	V	R	E	F	I	N	G	M	A	E	V	I	K	T	A	A	I	S	S	E	E	E	F	T	A	L	E	E	N	A	E	T	I	L	K	A	V	R	R	E	V	T	P	G	E	H	R	F	E	G	T	E	E	I	L	K	A	R	I	L	A	S	A	R	H	K	A	Y	V
Template Known Secondary structure					G	G	G	G	G	T	S																		T	T																									T	T	S		T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		R	E	T	G	L	R	A	L	L	N	L	G	H	T	F	G	H	A	I	E	A	E	M	G	Y	G	N	W	L	H	G	E	A	V	A	A	G	M	V	M	A	A	R	T	S	E	R	L	G	Q	F	S	S	A	E	T	Q	R	I	I	T	L	L	K	R	A	G	L	P	V	N	G	P	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																										.																																																	.	.	.	.	.	.	.
Template Conservation																										.
Template Sequence		V	S	A	G	L	R	N	L	L	N	W	G	H	S	I	G	H	A	I	E	A	I	L	T	.	P	Q	I	L	H	G	E	C	V	A	I	G	M	V	K	E	A	E	L	A	R	H	L	G	I	L	K	G	V	A	V	S	R	I	V	K	C	L	A	A	Y	G	L	P	T	S	L	K	D	A	R	I	R	K	L
Template Known Secondary structure						G	G	G	G	G	G	T	T												T	.	T	T	S																				T	T		S															T	T				S	T	T
Template Predicted Secondary structure																										.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
					308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																								.	.
Query SS confidence		.	.	.																																								.	.
Query Sequence		.	.	.	R	E	M	S	A	Q	A	Y	L	P	H	M	L	R	D	K	K	V	L	A	G	E	M	R	L	I	L	P	L	A	I	G	K	S	E	V	R	S	G	.	.	V	S	H	E	L	V	L	N	A	I	A
Query Conservation		.	.	.																																								.	.
Alig confidence		.	.	.																		.	.	.	.	.	.	.																.	.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		T	A	G	K	H	C	S	V	D	Q	L	M	F	N	M	A	L	D	K	K	.	.	.	.	.	.	.	I	V	L	L	S	A	I	G	T	P	Y	E	T	R	A	S	V	V	A	N	E	D	I	R	V	V	L	A
Template Known Secondary structure		T	T	T														T				.	.	.	.	.	.	.							T	T			S	S	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.								.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions