Job Description P07639 Confidence 100.00% Date Thu Jan 5 11:00:23 GMT 2012 Rank 13 Aligned Residues 322 % Identity 17% Template c3uhjE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:probable glycerol dehydrogenase; PDBTitle: crystal structure of a probable glycerol dehydrogenase from2 sinorhizobium meliloti 1021 Resolution 2.34 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	T	L	G	E	R	S	Y	P	I	T	I	A	S	G	L	F	N	E	P	A	S	F	L	P	L	K	S	G	E	Q	V	M	L	V	T	N	E	T	L	A	P	L	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D	T	V
Query Conservation
Alig confidence									.	.	.																				.																			.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.																				.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	G	G	P	N	K	.	.	.	Y	I	Q	R	A	G	E	I	D	K	L	A	A	Y	L	A	P	L	G	.	K	R	A	L	V	L	I	D	R	V	L	F	D	A	L	S	E	R	.	.	.	.	.	.	.	.	.	.	I	S	L	D	I	R	F	E	R	F	G	G	E	C	C	T	S	E	I	E	R	V
Template Known Secondary structure							S		.	.	.					T	T	G	G	G	G						T	T	T		.	S								G	G	G								.	.	.	.	.	.	.	.	.	.												S
Template Predicted Secondary structure									.	.	.																				.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70											.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		F	T	A	L	L	Q	K	P	H	G	R	D	T	T	L	V	A	L	G	G	G	V	V	G	D	L	T	G	F	A	A	A	S	Y	Q	R	G	V	R	F	I	Q	V	P	T	T	L	L	S	Q	V	D	S	S	V	G	G	K	T	A	V	N	H	P	L	G	K	N	M	I	G	A	F	.	.	Y	Q	P	A	S
Query Conservation																																																																											.	.
Alig confidence											.	.	.																				.	.														.	.																										.	.
Template Conservation											.	.	.																				.	.														.	.
Template Sequence		R	K	V	A	I	E	H	G	S	.	.	.	D	I	L	V	G	V	G	G	G	K	T	A	D	T	A	K	I	V	A	.	.	I	D	T	G	A	R	I	V	I	A	P	T	I	.	.	A	S	T	D	A	P	C	S	A	I	A	V	R	Y	T	E	H	G	V	Y	E	E	A	L	R	L	P	R	N	P	D	A
Template Known Secondary structure									T		.	.	.	S						S	S												.	.				T								S	S	.	.				S	T	T	T		S							T	T	S									S	S			S
Template Predicted Secondary structure											.	.	.																				.	.														.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200									.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query Sequence		V	V	V	D	L	D	C	L	K	T	L	P	P	R	E	L	A	S	G	L	A	E	V	I	K	Y	G	I	I	L	D	G	A	F	F	N	W	L	.	.	.	.	.	.	.	.	E	E	N	L	D	A	L	L	R	L	D	G	P	A	M	A	Y	C	I	R	R	C	C	E	L	.	.	.	.	.	.	.	.	.
Query Conservation																																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	V	D	S	A	L	V	A	A	A	P	A	R	F	L	V	A	G	I	G	D	A	L	S	T	W	F	E	A	R	S	N	I	E	S	R	T	D	N	A	G	G	F	P	A	T	E	A	G	X	A	I	A	R	H	C	Q	D	V	L	T	R	D	A	V	K	A	K	I	A	V	E	A	G	L	L	T	P	A
Template Known Secondary structure											T	S													T													T																																					T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		K	A	E	V	V	A	A	D	E	R	E	T	G	L	R	.	.	.	A	L	L	N	L	G	H	T	F	G	H	A	I	E	A	E	M	G	Y	G	N	W	L	H	G	E	A	V	A	A	G	M	V	M	A	A	R	T	S	E	R	L	G	Q	F	S	S	A	E	T	Q	R	I	I	T	L	L	K	R	A	G	L
Query Conservation																	.	.	.
Alig confidence																	.	.	.																																										.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		V	E	N	I	I	E	A	N	T	L	L	S	G	L	G	F	E	N	C	G	C	S	A	A	H	G	I	H	D	G	L	T	V	L	E	E	V	H	G	Y	F	H	G	E	K	V	A	F	G	T	L	C	L	L	X	L	E	N	R	.	.	.	.	D	R	A	E	I	E	A	X	I	R	F	C	R	S	V	G	L
Template Known Secondary structure										T																							T	T	S	G	G	G	T	T	S																	T	T		.	.	.	.														T	T	T
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.					.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		303	.	.	.	.	.				.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		P	V	N	G	P	R	.	.	.	E	M	S	A	Q	A	Y	L	P	H	M	L	R	D	K	K	V	L	A	G	E	M	R	L	I	L	P	L	A	I	G	K	S	E	V	R	S	G	V	S	H	E	L	V	L	N	A	I	A	D	C	Q	S
Query Conservation								.	.	.
Alig confidence								.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	K	L	A	D	L	G	I	V	D	D	V	P	A	K	I	G	R	V	A	E	A	A	C	R	P	G	N	I	I	Y	A	T	.	.	.	.	.	.	.	.	.	.	P	V	T	I	T	V	P	A	V	R	D	A	I	L	A	L	D	A
Template Known Secondary structure				S	G	G	G	G	T			S	S													T	S	T	T		G	G	G	G	S	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.											.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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