Job Description P07639 Confidence 100.00% Date Thu Jan 5 11:00:23 GMT 2012 Rank 20 Aligned Residues 325 % Identity 12% Template c3rf7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:iron-containing alcohol dehydrogenase; PDBTitle: crystal structure of an iron-containing alcohol dehydrogenase2 (sden_2133) from shewanella denitrificans os-217 at 2.12 a resolution Resolution 2.12 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		S	Y	P	I	T	I	A	S	G	L	F	N	E	P	A	S	F	L	P	L	K	S	G	E	.	.	Q	V	M	L	V	T	N	E	T	L	A	P	L	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D	T	V	F	T	A	L	L
Query Conservation																										.	.
Alig confidence																										.	.														.	.															.	.
Template Conservation																																									.	.															.	.
Template Sequence		V	P	K	X	I	F	G	R	G	S	F	V	Q	L	D	T	V	L	E	Q	E	R	T	D	A	N	D	F	V	V	F	L	V	D	D	V	H	Q	H	.	.	K	P	L	A	A	R	V	P	N	K	A	H	D	L	.	.	V	I	Y	V	N	V	D	D	E	P	T	T	V	Q	V	D	E	L	T	A	Q	V	K
Template Known Secondary structure			S					S	T	T	G	G	G	G							T	T			S	T	T									G	G	G	T	T	.	.	S						S				T	T	S		.	.							S	S			B
Template Predicted Secondary structure																																									.	.															.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	P	H	G	R	D	T	T	L	V	A	L	G	G	G	V	V	G	D	L	T	G	F	A	A	A	S	Y	Q	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	F	I	Q	V	P	T	T	L	L	S	Q	V	D	S	S	V	G	G	K	T	A	V	N	H	P	L	G	K	N	M
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																																																											.	.
Template Sequence		A	F	N	T	K	L	P	V	S	V	V	G	L	G	G	G	S	T	X	D	L	A	K	A	V	S	L	X	L	T	N	P	G	S	S	S	E	Y	Q	G	W	D	L	I	K	N	P	A	V	H	H	I	G	I	P	T	V	.	.	S	G	T	G	A	E	A	S	R	T	A	V	L	C	G	P	V	R	K	L	G
Template Known Secondary structure					S	S			S							S														T	S	S		S		G	G	G	G				S				S										S	S	.	.		S	S		T	T	T		S							S	S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		154		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		I	.	G	A	F	Y	Q	P	A	S	V	V	V	D	L	D	C	L	K	T	L	P	P	R	E	L	A	S	G	L	A	E	V	I	K	Y	G	I	I	L	D	G	A	F	F	N	W	L	E	E	N	L	D	A	L	L	R	L	D	G	P	A	M	A	Y	C	I	R	R	C	C	E	L	K	A	E	V	V	A	A
Query Conservation			.
Alig confidence			.																																								.	.
Template Conservation																																											.	.
Template Sequence		L	N	S	D	Y	T	V	F	D	Q	I	I	X	D	S	E	L	I	A	G	V	P	T	D	Q	W	F	Y	T	G	X	D	C	F	I	H	C	V	E	S	L	.	.	Q	G	T	Y	L	N	E	F	A	K	A	F	A	E	K	S	X	D	L	C	R	E	V	Y	L	D	D	H	P	E	K	D	D	K	L	X	X
Template Known Secondary structure				S	G	G	G	S		S						G	G	G	G	T	T																						.	.		S	T	T																					T	S			T	T
Template Predicted Secondary structure																																											.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		233	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																																																																			.
Query SS confidence												.	.	.																																																																			.
Query Sequence		D	E	R	E	T	G	L	R	A	L	.	.	.	L	N	L	G	H	T	F	G	H	A	I	E	A	E	M	G	Y	G	N	W	L	H	G	E	A	V	A	A	G	M	V	M	A	A	R	T	S	E	R	L	G	Q	F	S	S	A	E	T	Q	R	I	I	T	L	L	K	R	A	G	L	P	V	N	G	P	R	.
Query Conservation												.	.	.																																																																			.
Alig confidence												.	.	.												.	.	.																										.	.	.	.	.	.	.																					.
Template Conservation																										.	.	.																										.	.	.	.	.	.	.
Template Sequence		A	S	Y	X	G	G	X	S	I	A	Y	S	Q	V	G	A	C	H	A	V	S	Y	G	L	.	.	.	G	Y	V	L	G	Y	H	H	G	I	G	N	C	L	A	F	D	V	L	E	E	F	Y	P	E	.	.	.	.	.	.	.	G	V	A	E	F	R	K	X	X	E	I	H	N	I	T	L	P	K	N	I	C
Template Known Secondary structure												T	S													.	.	.																	T	T		T	T	T	S			.	.	.	.	.	.	.												T	T							S	S
Template Predicted Secondary structure																										.	.	.																										.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.								290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	S	A	Q	A	Y	L	P	H	M	L	R	D	K	K	V	L	A	G	E	M	R	L	I	L	P	L	A	I	G	K	S	E	V	R	S	G	V	S	H	E	L	V	L	N	A	I	A	D	C
Query Conservation
Alig confidence																							.	.	.	.								.
Template Conservation																							.	.	.	.								.
Template Sequence		K	D	L	P	D	E	T	I	A	K	X	V	A	V	T	K	S	X	G	P	L	.	.	.	.	W	D	N	V	Y	G	K	.	G	W	E	E	K	V	T	D	E	X	L	T	K	L	F	R	R	I
Template Known Secondary structure		T	T															T					.	.	.	.							T	.	T		T	T	T	S
Template Predicted Secondary structure																							.	.	.	.								.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.					.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions