Job Description P07639 Confidence 33.25% Date Thu Jan 5 11:00:23 GMT 2012 Rank 214 Aligned Residues 77 % Identity 13% Template c3q9sA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding response regulator; PDBTitle: crystal structure of rra(1-215) from deinococcus radiodurans Resolution 2.40 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	V	M	L	V	T	N	E	T	L	A	P	L	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D	T	V	F	T	A	L	L	Q	K	P	H	G	R	D	T	T	L	V	A	L	G	G	G	V	V	G	D	L	T	G	F	A
Query Conservation
Alig confidence											.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	I	L	V	I	E	D	D	.	.	.	H	D	I	A	N	V	L	R	X	D	L	T	D	A	G	Y	V	V	D	H	A	.	.	.	.	.	.	.	.	.	.	.	D	S	A	X	N	G	L	I	K	A	R	E	D	H	P	D	L	I	L	L	D	L	G	L	P	D	F	D	G	G	D	V	V	Q	R	L
Template Known Secondary structure									S		.	.	.													T	T	T							.	.	.	.	.	.	.	.	.	.	.	S	S											S			S								S
Template Predicted Secondary structure											.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.												.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	S	Y	Q	R	G	V	R	F	I	Q	V
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		R	.	.	K	N	S	A	L	P	I	I	V	L
Template Known Secondary structure			.	.	T	T
Template Predicted Secondary structure			.	.
Template SS confidence
		70			.	.	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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