Job Description P07639 Confidence 43.19% Date Thu Jan 5 11:00:23 GMT 2012 Rank 169 Aligned Residues 106 % Identity 12% Template c3n0wA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc branched chain amino acid family transporter, PDBTitle: crystal structure of a branched chain amino acid abc transporter2 periplasmic ligand-binding protein (bxe_c0949) from burkholderia3 xenovorans lb400 at 1.88 a resolution Resolution 1.88 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure															.	.	.																												.
Query SS confidence															.	.	.																												.
Query Sequence		G	E	R	S	Y	P	I	T	I	A	S	G	L	.	.	.	F	N	E	P	A	S	F	L	P	L	K	S	G	E	Q	V	M	L	V	T	N	E	T	L	A	P	L	.	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D	T	V
Query Conservation															.	.	.																												.
Alig confidence															.	.	.																												.																												.	.	.	.
Template Conservation																																																																									.	.	.	.
Template Sequence		E	C	N	G	Y	G	I	G	F	L	Y	N	F	T	S	I	V	K	T	V	V	Q	A	Q	L	A	K	G	Y	K	T	W	F	L	X	L	P	D	A	A	Y	G	D	L	X	N	A	A	I	R	R	E	L	T	A	G	G	G	Q	I	V	G	S	V	R	F	P	F	E	T	Q	.	.	.	.	D	F	S	S	Y
Template Known Secondary structure		T			S	S					S																	T	T										S	S																		T											T	T			.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	A	L	L	Q	K	P	H	G	R	D	T	T	L	V	A	L	G	G	G	V	V	G	D	L	T	G	F	A	A	A	S	Y	Q	R	G	V	R
Query Conservation
Alig confidence											.	.	.										.	.
Template Conservation											.	.	.										.	.
Template Sequence		L	L	Q	A	K	A	S	G	A	.	.	.	Q	L	I	V	S	T	S	G	G	.	.	A	A	N	I	N	I	X	K	Q	A	R	E	F	G	L	P
Template Known Secondary structure									T		.	.	.	S									.	.													T	T		S
Template Predicted Secondary structure											.	.	.										.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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