Return to main results Retrieve Phyre Job Id

Job DescriptionP07639
Confidence29.81%DateThu Jan 5 11:00:23 GMT 2012
Rank243Aligned Residues63
% Identity21%Templatec3mk3L_
PDB info PDB header:transferaseChain: L: PDB Molecule:6,7-dimethyl-8-ribityllumazine synthase; PDBTitle: crystal structure of lumazine synthase from salmonella typhimurium lt2
Resolution3.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.... .....50.........60. ........70.........80.........90.........100...
Predicted Secondary structure 



...

....

















Query SS confidence 











. . .
















. . . .









































Query Sequence  SGEQVMLVTNET. . . LAPLYLDKVRGVLEQAG. . . . VNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVALG
Query Conservation     






  ...        
   
   
....
          
       
               
 




Alig confidence 











...
















....









.....
















...






Template Conservation     




 
 

  
   

 

   
   
      
 
  


.....
 


     
  
   ...



 

Template Sequence  PDARVAITIARFNQFINDSLLDGAVDALTRIGQVKDDNITVVWVPG. . . . . AYELPLATEALAKSGKY. . . DAVVALG
Template Known Secondary structure  TT

STTTT


TTSSS.....GGGT


...S
Template Predicted Secondary structure 














.....


...
Template SS confidence 













































































   11........20.........30.........40.........50...... ...60.........70... ......80
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions