Job Description P07639 Confidence 27.25% Date Thu Jan 5 11:00:23 GMT 2012 Rank 262 Aligned Residues 96 % Identity 11% Template c3mbjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative phosphomethylpyrimidine kinase; PDBTitle: crystal structure of a putative phosphomethylpyrimidine kinase2 (bt_4458) from bacteroides thetaiotaomicron vpi-5482 at 2.10 a3 resolution (rhombohedral form) Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.											.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query Sequence		M	E	R	I	V	V	T	L	G	E	R	S	Y	P	I	T	I	A	S	G	L	F	N	E	P	A	S	F	L	P	L	K	S	G	E	Q	V	M	L	V	T	N	E	T	L	.	.	.	.	.	.	.	.	.	.	A	P	L	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	.	.	.	.	.	.	N	V
Query Conservation																																															.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Alig confidence											.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		V	Q	F	D	A	I	Y	T	G	.	.	.	.	.	Y	L	G	S	P	R	Q	I	Q	I	V	S	D	F	I	K	D	F	R	Q	P	D	S	L	I	V	A	D	P	V	L	G	D	N	G	R	L	Y	T	N	F	D	X	E	X	V	K	E	X	R	H	L	I	T	K	A	D	V	I	T	P	N	L	T	E	L
Template Known Secondary structure					S						.	.	.	.	.				S																	T	T												T	T				T	T														T	T		S					B
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D	T	V	F	T	A	L	L	Q	K	P	H	G	R	D	T	T	L	V	A	L	G	G
Query Conservation
Alig confidence																															.	.	.
Template Conservation																															.	.	.
Template Sequence		F	Y	L	L	D	E	P	Y	K	A	D	S	T	D	E	E	L	K	E	Y	L	R	L	L	S	D	K	G	P	.	.	.	Q	V	V	I	I	T	S	V
Template Known Secondary structure						T					S																T	T	S		.	.	.	S
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions