Return to main results Retrieve Phyre Job Id

Job DescriptionP07639
Confidence22.84%DateThu Jan 5 11:00:23 GMT 2012
Rank289Aligned Residues88
% Identity18%Templatec3lciA_
PDB info PDB header:lyaseChain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70... ......80.........90.........100.........110.........120
Predicted Secondary structure 








.














Query SS confidence 































.














































Query Sequence  NETLAPLYLDKVRGVLEQAGVNVDSVILPDGE. QYKSLAVLDTVFTALLQKPHGRDTTLVALGGGVVGDLTGFAAASYQR
Query Conservation 
          
   
   

          
.       
               
 










 

  
     
Alig confidence 































.














































Template Conservation 
  

   
   
  
   

 

   




   

  

  
             

 

   
  
 
  
  
   
Template Sequence  QQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRY
Template Known Secondary structure  TS
B
TT
SSSGGGTGGGS
TTTS


SS
Template Predicted Secondary structure 



























Template SS confidence 















































































   1920.........30.........40.........50.........60.........70.........80.........90........
 
   121........
Predicted Secondary structure 




Query SS confidence 








Query Sequence  GVRFIQVPT
Query Conservation 
 
 
 


Alig confidence 








Template Conservation 


 
 
  
Template Sequence  GFDAVSAVT
Template Known Secondary structure  T
S
Template Predicted Secondary structure 



Template SS confidence 








   99100.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions