Job Description P07639 Confidence 30.89% Date Thu Jan 5 11:00:23 GMT 2012 Rank 233 Aligned Residues 92 % Identity 9% Template c3h6hB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:glutamate receptor, ionotropic kainate 2; PDBTitle: crystal structure of the glur6 amino terminal domain dimer assembly2 mpd form Resolution 2.90 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	E	P	A	S	F	L	P	L	K	S	G	E	Q	V	M	L	V	T	N	E	T	L	A	P	L	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D	T	V	F	T	A	L	L	Q	K	P	H	G	R	D	T	T	L	V	A
Query Conservation
Alig confidence																																																							.	.	.	.	.															.	.	.
Template Conservation																																																							.	.	.	.	.															.	.	.
Template Sequence		S	R	A	I	L	D	L	V	Q	F	F	K	W	K	T	V	T	V	V	Y	D	D	S	T	G	L	I	R	L	Q	E	L	I	K	A	P	S	R	Y	N	L	R	L	K	I	R	Q	L	P	A	D	T	K	.	.	.	.	.	D	A	K	P	L	L	K	E	M	K	R	G	K	E	.	.	.	F	H	V	I	F
Template Known Secondary structure												T	T		S							S	S	T						S					T	G	G	G	T	S	S										S	S	G	G	.	.	.	.	.	G											T	T		.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.															.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.						.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	G	G	V	V	G	D	L	T	G	F	A	A	A	S	Y	Q	R	G	V	R
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		D	C	S	H	.	.	E	M	A	A	G	I	L	K	Q	A	L	A	M	G	M	M
Template Known Secondary structure			S			.	.														T
Template Predicted Secondary structure						.	.
Template SS confidence
		198	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions