Job Description P07639 Confidence 36.01% Date Thu Jan 5 11:00:23 GMT 2012 Rank 202 Aligned Residues 100 % Identity 12% Template c3h5lB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:putative branched-chain amino acid abc PDBTitle: crystal structure of a putative branched-chain amino acid2 abc transporter from silicibacter pomeroyi Resolution 1.70 Å

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		23	.	.	.	.	.	.	30	.	.									.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.																	.
Query SS confidence												.	.	.	.	.	.	.	.																	.
Query Sequence		N	E	P	A	S	F	L	P	L	K	.	.	.	.	.	.	.	.	S	G	E	Q	V	M	L	V	T	N	E	T	L	A	P	L	.	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D	T	V	F	T	A	L	L	Q	K	P	H
Query Conservation												.	.	.	.	.	.	.	.																	.
Alig confidence												.	.	.	.	.	.	.	.																	.																												.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		G	G	F	L	K	F	L	K	D	I	E	D	N	G	E	F	S	R	P	N	N	K	I	A	I	I	T	G	P	G	I	Y	S	V	N	I	A	N	A	I	R	D	G	A	G	E	Y	G	Y	D	V	S	L	F	E	T	V	A	I	P	V	S	.	.	.	.	D	W	G	P	T	L	A	K	L	R	A	D	P	P
Template Known Secondary structure														T	T	S				S	S	S								S	S														G	G	G	G	T											S	S		S	.	.	.	.												S
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	D	T	T	L	V	A	L	G	G	G	V	V	G	D	L	T	G	F	A	A	A	S	Y	Q	R	G	V	R	F	I	Q	V	P	T	T
Query Conservation
Alig confidence		.	.	.										.
Template Conservation		.	.	.										.
Template Sequence		.	.	.	A	V	I	V	V	T	H	F	Y	.	P	Q	D	Q	A	L	F	M	N	Q	F	M	T	D	P	T	N	S	L	V	Y	L	Q	Y
Template Known Secondary structure		.	.	.	S									.												T	T	S			S							S
Template Predicted Secondary structure		.	.	.										.
Template SS confidence
					249	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions