Job Description P07639 Confidence 37.45% Date Thu Jan 5 11:00:23 GMT 2012 Rank 193 Aligned Residues 75 % Identity 16% Template c3dzdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state Resolution 2.40 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		E	Q	V	M	L	V	T	N	E	T	L	A	P	L	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D	T	V	F	T	A	L	L	Q	K	P	H	G	R	D	T	T	L	V	A	.	.	.	L	G	G	G	V	V	G	D	L	T
Query Conservation																																																																					.	.	.
Alig confidence											.	.	.																						.	.	.	.	.	.	.	.	.	.	.																.	.	.						.	.	.
Template Conservation											.	.	.																						.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Sequence		K	R	V	L	V	V	D	D	E	.	.	.	E	S	I	T	S	S	L	S	A	I	L	E	E	E	G	Y	H	P	D	T	A	.	.	.	.	.	.	.	.	.	.	.	K	T	L	R	E	A	E	K	K	I	K	E	L	F	F	.	.	.	P	V	I	V	L	D	V	W	X	P	D	G	D	G	V	N	F	I
Template Known Secondary structure									S		.	.	.														T	T							.	.	.	.	.	.	.	.	.	.	.	S	S											S			.	.	.	S						S			T	T			T	T	T
Template Predicted Secondary structure											.	.	.																						.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.												.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	A	A	A	S	Y	Q	R	G	V	R	F	I	Q	V
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		D	F	I	K	E	N	.	S	P	D	S	V	V	I	V	I
Template Known Secondary structure								.		T	T
Template Predicted Secondary structure								.
Template SS confidence
		65	.	.	.	.	70		.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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