Job Description P07639 Confidence 100.00% Date Thu Jan 5 11:00:23 GMT 2012 Rank 6 Aligned Residues 308 % Identity 40% Template c3clhA_ PDB info PDB header:lyase Chain: A: PDB Molecule:3-dehydroquinate synthase; PDBTitle: crystal structure of 3-dehydroquinate synthase (dhqs)from2 helicobacter pylori Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	V	T	L	G	E	R	S	Y	P	I	T	I	A	S	G	L	F	N	E	P	A	S	F	L	P	L	K	S	G	E	Q	V	M	L	V	T	N	E	T	L	A	P	L	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D	T
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.																																						.	.
Template Conservation																		.	.	.	.	.	.	.	.																																						.	.
Template Sequence		I	L	I	P	L	K	E	K	N	Y	K	V	F	L	G	E	.	.	.	.	.	.	.	.	L	P	E	I	K	L	K	Q	K	A	L	I	I	S	D	S	I	V	A	G	L	H	L	P	Y	L	L	E	R	L	K	A	L	E	V	R	V	.	.	C	V	I	E	S	G	E	K	Y	K	N	F	H	S	L	E	R
Template Known Secondary structure			B			B		S	S	S		B				S	S	.	.	.	.	.	.	.	.							S	S												T	T	T						T	T				S					.	.					S	S	G	G	G		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.																																						.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.									20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	T	A	L	L	Q	K	P	H	G	R	D	T	T	L	V	A	L	G	G	G	V	V	G	D	L	T	G	F	A	A	A	S	Y	Q	R	G	V	R	F	I	Q	V	P	T	T	L	L	S	Q	V	D	S	S	V	G	G	K	T	A	V	N	H	P	L	G	K	N	M	I	G	A	F	Y	Q	P	A	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	N	N	A	F	E	M	Q	L	N	R	H	S	L	M	I	A	L	G	G	G	V	I	S	D	M	V	G	F	A	S	S	I	Y	F	R	G	I	D	F	I	N	I	P	T	T	L	L	A	Q	V	D	A	S	V	G	G	K	T	G	I	N	T	P	Y	G	K	N	L	I	G	S	F	H	Q	P	K	A	V
Template Known Secondary structure									T	T			T	T								S														G	G	G										S						T	T	S	S	S								T	T												S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	D	L	D	C	L	K	T	L	P	P	R	E	L	A	S	G	L	A	E	V	I	K	Y	G	I	I	L	D	G	A	F	F	N	W	L	E	E	N	L	D	A	L	L	R	L	D	G	P	A	M	A	Y	C	I	R	R	C	C	E	L	K	A	E	V	V	A	A	D	E	R	E	T	G	L	R	A	L	L
Query Conservation
Alig confidence																																									.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		Y	M	D	L	A	F	L	K	T	L	E	K	R	E	F	Q	A	G	V	A	E	I	I	K	M	A	V	C	F	D	K	N	L	V	E	R	L	E	T	.	.	.	.	.	.	K	D	L	K	D	C	L	E	E	V	I	F	Q	S	V	N	I	K	A	Q	V	V	.	.	.	.	.	.	.	.	.	R	A	G	L
Template Known Secondary structure					T	T	S	G	G	G	S																														.	.	.	.	.	.	S		T	T	T	S																	.	.	.	.	.	.	.	.	.		T	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.										.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	G	H	T	F	G	H	A	I	E	A	E	M	G	Y	G	N	W	L	H	G	E	A	V	A	A	G	M	V	M	A	A	R	T	S	E	R	L	G	Q	F	S	S	A	E	T	Q	R	I	I	T	L	L	K	R	A	G	L	P	V	N	G	P	R	E	M	S	A	Q	A	Y	L	P	H	M	L	R	D	K
Query Conservation
Alig confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Y	G	H	T	F	G	H	A	I	E	K	E	T	D	Y	E	R	F	L	H	G	E	A	I	A	I	G	M	R	M	A	N	D	L	A	L	S	L	G	M	L	T	L	K	E	Y	E	R	I	E	N	L	L	K	K	F	D	L	I	F	H	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T											T	T	T	S	S																						T	S	S															T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	L	A	G	E	M	R	L	I	L	P	L	A	I	G	K	S	E	V	R	S	G	V	S	H	E	L	V	L	N	A	I	A	D	C	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	K	F	I	L	P	K	G	V	G	A	F	E	V	A	S	H	I	P	K	E	T	I	I	K	V	L	E	K	W	H
Template Known Secondary structure		.	.	.	.	.	.	.							S	S	S																	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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