Job Description P07639 Confidence 100.00% Date Thu Jan 5 11:00:23 GMT 2012 Rank 17 Aligned Residues 321 % Identity 16% Template c3ce9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol dehydrogenase; PDBTitle: crystal structure of glycerol dehydrogenase (np_348253.1) from2 clostridium acetobutylicum at 2.37 a resolution Resolution 2.37 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	T	L	G	E	R	S	Y	P	I	T	I	A	S	G	L	F	N	E	P	A	S	F	L	P	L	K	S	G	E	Q	V	M	L	V	T	N	E	T	L	A	P	L	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D	T	V
Query Conservation
Alig confidence									.	.	.																																																													.	.	.	.	.	.	.
Template Conservation									.	.	.																																																													.	.	.	.	.	.	.
Template Sequence		R	I	A	I	P	L	I	.	.	.	L	E	V	G	N	N	K	I	Y	N	I	G	Q	I	I	K	K	G	N	F	K	R	V	S	L	Y	F	G	E	G	I	Y	E	L	F	G	E	T	I	E	K	S	I	K	S	S	N	I	E	I	E	A	V	E	T	V	K	N	I	D	.	.	.	.	.	.	.	F	D	E
Template Known Secondary structure							S		.	.	.					S	S		G	G	G						G	G	G	T		S								T	T															T	T	T													B	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.																																																													.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.								.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	A	L	L	Q	K	P	H	G	R	D	T	T	L	V	A	L	G	G	G	V	V	G	D	L	T	G	F	A	A	A	S	Y	Q	R	G	V	R	F	I	Q	V	P	T	T	L	L	S	Q	V	D	S	S	V	G	G	K	T	A	V	N	H	P	L	G	K	N	M	I	G	A	F	Y	Q	P	A	S	V	V
Query Conservation
Alig confidence																																	.	.														.	.																									.
Template Conservation																																	.	.														.	.																									.
Template Sequence		I	G	T	N	A	F	K	I	P	A	E	V	D	A	L	I	G	I	G	G	G	K	A	I	D	A	V	K	Y	X	A	.	.	F	L	R	K	L	P	F	I	S	V	P	T	S	.	.	T	S	N	D	G	F	S	S	P	V	A	S	L	L	I	N	G	K	R	T	S	V	P	A	.	K	T	P	D	G	I	V
Template Known Secondary structure							T	T	S		T	T									S												.	.				T								S		.	.		S	S	G	G	G	T	S	S							T	T								.				S
Template Predicted Secondary structure																																	.	.														.	.																									.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.						.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																														.									.	.																						.	.	.	.	.
Query SS confidence																														.									.	.																						.	.	.	.	.
Query Sequence		V	D	L	D	C	L	K	T	L	P	P	R	E	L	A	S	G	L	A	E	V	I	K	Y	G	I	I	L	.	D	G	A	F	F	N	W	L	.	.	E	E	N	L	D	A	L	L	R	L	D	G	P	A	M	A	Y	C	I	R	R	.	.	.	.	.	C	C	E	L	K	A	E	V	V	A	A	D	E	R	E
Query Conservation																														.									.	.																						.	.	.	.	.
Alig confidence																														.									.	.																						.	.	.	.	.
Template Conservation
Template Sequence		V	D	I	D	V	I	K	G	S	P	E	K	F	I	Y	S	G	I	G	D	L	V	S	N	I	T	A	L	Y	D	W	K	F	E	E	E	N	H	K	S	I	I	D	D	F	A	V	X	I	S	K	K	S	V	N	S	F	V	R	T	D	F	K	S	I	K	D	E	V	F	L	K	E	L	V	D	S	L	T	X
Template Known Secondary structure									T	S																												T	T	S																								S		T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		237	.	.	240	.	.	.									.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.
Query Sequence		T	G	L	R	A	L	L	.	.	.	.	.	.	.	.	N	L	G	H	T	F	G	H	A	I	E	A	E	M	G	Y	G	N	W	L	H	G	E	A	V	A	A	G	M	V	M	A	A	R	T	S	E	R	L	G	Q	F	S	S	A	E	T	Q	R	I	I	T	L	L	K	R	A	G	L	P	V	N	G	P	R
Query Conservation									.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																.																							.	.	.	.	.	.	.
Template Conservation																																.																							.	.	.	.	.	.	.
Template Sequence		N	G	I	A	X	E	I	A	G	N	S	S	P	A	S	G	A	E	H	L	I	S	H	A	L	D	K	F	L	P	.	N	P	Q	L	H	G	I	Q	V	G	V	A	T	Y	I	X	S	K	V	H	K	H	.	.	.	.	.	.	.	R	E	E	R	I	K	K	I	L	S	D	T	G	F	F	N	Y	V	K	G
Template Known Secondary structure										T	S	S	T	T	T		S														S	.	S																				T	S	.	.	.	.	.	.	.	S											T	T							T
Template Predicted Secondary structure																																.																							.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.								.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
			309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	E	M	S	A	Q	A	Y	L	P	H	M	L	R	D	K	K	V	L	A	G	E	M	R	L	I	L	P	L	A	I	G	K	S	E	V	R	S	G	V	S	H	E	L	V	L	N	A	I	A	D
Query Conservation		.
Alig confidence		.																										.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	X	K	K	S	D	F	K	R	A	I	S	E	A	H	L	I	K	P	A	R	Y	T	Y	L	.	.	.	.	.	.	.	.	.	.	H	V	E	K	N	C	E	T	A	K	E	I	V	D	T
Template Known Secondary structure		T																		S	T	T	S			G	G	.	.	.	.	.	.	.	.	.	.	G	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.											330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions