Job Description P07639 Confidence 100.00% Date Thu Jan 5 11:00:23 GMT 2012 Rank 9 Aligned Residues 338 % Identity 16% Template c3bfjK_ PDB info PDB header:oxidoreductase Chain: K: PDB Molecule:1,3-propanediol oxidoreductase; PDBTitle: crystal structure analysis of 1,3-propanediol oxidoreductase Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		E	R	I	V	V	T	L	G	E	R	S	Y	P	I	T	I	A	S	G	L	F	N	E	P	A	S	F	L	P	L	K	S	G	E	Q	V	M	L	V	T	N	E	T	L	A	P	L	.	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V
Query Conservation																																																	.
Alig confidence												.	.	.																																			.																	.	.
Template Conservation												.	.	.																																																				.	.
Template Sequence		R	M	F	D	Y	L	V	P	N	V	.	.	.	N	F	F	G	P	N	A	I	S	V	V	G	E	R	C	Q	L	L	G	G	K	K	A	L	L	V	T	D	K	G	L	R	K	D	G	A	V	D	K	T	L	H	Y	L	R	E	A	G	I	E	V	.	.	A	I	F	D	G	V	E	P	N	P	K	D	T	N
Template Known Secondary structure										S		.	.	.				S	T	T	G	G	G	G								T	T		S								T	T	T				S	S											T	T				.	.								S	S		B
Template Predicted Secondary structure												.	.	.																																																				.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	T	V	F	T	A	L	L	Q	K	P	H	G	R	D	T	T	L	V	A	L	G	G	G	V	V	G	D	L	T	G	F	A	A	A	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	G	V	R	F	I	Q	V	P	T	T	L	L	S	Q	V	D	S	S	V	G	G	K	T	A
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		V	R	D	G	L	A	V	F	R	R	E	Q	C	.	.	.	D	I	I	V	T	V	G	G	G	S	P	H	D	C	G	K	G	I	G	I	A	A	T	H	E	G	D	L	Y	Q	Y	A	G	I	E	T	L	T	N	P	L	P	P	I	V	A	V	N	T	T	A	G	T	A	S	E	V	T	R	H	C	V	L	T
Template Known Secondary structure												T	T		.	.	.								S														T	T	S	S	S		S	G	G	G		B	S	S				S												S	S			G	G	G		S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure												.																																											.	.
Query SS confidence												.																																											.	.
Query Sequence		V	N	H	P	L	G	K	N	M	I	.	G	A	F	Y	Q	P	A	S	V	V	V	D	L	D	C	L	K	T	L	P	P	R	E	L	A	S	G	L	A	E	V	I	K	Y	G	I	I	L	D	G	A	F	.	.	F	N	W	L	E	E	N	L	D	A	L	L	R	L	D	G	P	A	M	A	Y	C	I	R	R
Query Conservation												.																																											.	.
Alig confidence												.																																											.	.
Template Conservation
Template Sequence		N	T	E	T	K	V	K	F	V	I	V	S	W	R	N	L	P	S	V	S	I	N	D	P	L	L	M	I	G	K	P	A	A	L	T	A	A	T	G	M	D	A	L	T	H	A	V	E	A	Y	I	S	K	D	A	N	P	V	T	D	A	A	A	M	Q	A	I	R	L	I	A	R	N	L	R	Q	A	V	A	L
Template Known Secondary structure			T	T	T		S							G	G	G	S		S						G	G	G	T	T	T																							S	T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																			.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	C	E	L	K	A	E	V	V	A	A	D	E	R	E	T	G	L	R	A	L	L	N	L	G	H	T	F	G	H	A	I	E	.	A	E	M	G	Y	G	N	W	L	H	G	E	A	V	A	A	G	M	V	M	A	A	R	T	S	E	R	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																			.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	N	L	Q	A	R	E	Y	M	A	Y	A	S	L	L	A	G	M	A	F	N	N	A	N	L	G	Y	V	H	A	M	A	H	Q	L	G	G	L	Y	D	M	P	H	G	V	A	N	A	V	L	L	P	H	V	A	R	Y	N	L	I	A	N	P	E	K	F	A	D	I	A	E	L	M	G	E	N	I	T	G
Template Known Secondary structure		T	T																																																										G	G	G												T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
						284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																										.
Query SS confidence		.	.	.	.																										.
Query Sequence		.	.	.	.	Q	F	S	S	A	E	T	Q	R	I	I	T	L	L	K	R	A	G	L	P	V	N	G	P	R	.	E	M	S	A	Q	A	Y	L	P	H	M	L	R	D	K	K	V	L	A	G	E	M	R	L	I	L	P	L	A	I	G	K	S	E	V	R	S	G	V	S	H	E	L	V	L	N	A	I	A	D
Query Conservation		.	.	.	.																										.
Alig confidence		.	.	.	.																										.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	T	L	D	A	A	E	K	A	I	A	A	I	T	R	L	S	M	D	I	G	I	P	Q	H	L	R	D	L	G	V	K	E	T	D	F	P	Y	M	A	E	M	A	L	K	D	G	N	A	F	S	N	.	.	.	.	.	.	.	.	.	.	.	.	P	R	K	G	N	E	Q	E	I	A	A	I	F	R	Q
Template Known Secondary structure																						T	T					G	G	G	G	T			G	G	G											S	G	G	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370													.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		359
Predicted Secondary structure
Query SS confidence
Query Sequence		C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		386

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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