Job Description P07639 Confidence 84.28% Date Thu Jan 5 11:00:23 GMT 2012 Rank 63 Aligned Residues 80 % Identity 20% Template c3afoB_ PDB info PDB header:transferase Chain: B: PDB Molecule:nadh kinase pos5; PDBTitle: crystal structure of yeast nadh kinase complexed with nadh Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	V	M	L	V	T	N	E	T	L	A	P	L	.	.	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D	T	V	F	T	A	L	L	Q	K	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																				.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	V	Y	I	T	K	K	P	W	T	P	S	T	R	E	A	M	V	E	F	I	T	H	L	H	E	S	Y	P	E	V	N	V	I	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	P	D	V	A	E	E	I	S	Q	D	F	K	S	P	L	E	N	D	P	N	R	P	H	I	L	Y	T	G	P	E	Q
Template Known Secondary structure										T	T																				T	T					.	.	.	.	.	.	.	.	.	.	.	.										G	G	G			S		G	G	G		T	T	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.													.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
					94	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.												.																			.
Query SS confidence		.	.	.												.																			.
Query Sequence		.	.	.	G	R	D	T	T	L	V	A	L	G	G	.	G	V	V	G	D	L	T	G	F	A	A	A	S	Y	Q	R	G	V	.	R	F	I	Q	V	P	T
Query Conservation		.	.	.												.																			.
Alig confidence		.	.	.												.									.	.	.								.
Template Conservation																									.	.	.
Template Sequence		D	I	V	N	R	T	D	L	L	V	T	L	G	G	D	G	T	I	L	H	G	V	S	.	.	.	M	F	G	N	T	Q	V	P	P	V	L	A	F	A	L
Template Known Secondary structure								S							S										.	.	.		T	T	T	S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions