 |
Job Description | P07639 | Confidence | 87.75% | Date | Thu Jan 5 11:00:23 GMT 2012 |
Rank | 58 | Aligned Residues | 98 |
% Identity | 17% | Template | c2xecD_ |
PDB info |
PDB header:isomerase | Chain: D: PDB Molecule:putative maleate isomerase; |
PDBTitle: nocardia farcinica maleate cis-trans isomerase bound to2 tris
|
Resolution | 2.20 Å |
|
 |
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
|
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
. |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Query Sequence |   |
P | A | S | F | L | P | L | K | S | G | E | Q | V | M | L | V | T | N | E | T | L | A | P | L | Y | L | D | K | V | R | G | V | L | E | Q | A | G | V | N | V | D | S | V | I | L | P | D | G | E | Q | Y | K | S | L | . |
. |
A | V | L | D | T | V | F | T | A | L | L | Q | K | P | H | G | R | D | T | T | L | V | . |
A |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
| . |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
  |   |   |
|
|   |
|
|
|   |   |
|
|
|
|   |
|
| . | . |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
Template Sequence |   |
L | V | E | G | L | R | A | L | D | A | Q | R | V | A | L | V | T | P | . |
. |
Y | M | R | P | L | A | E | K | V | V | A | Y | L | E | A | E | G | F | T | I | S | D | W | R | A | L | E | V | A | D | N | T | E | V | G | C | I | P | G | E | Q | V | M | A | A | A | R | S | L | D | L | S | E | V | D | A | L | V | I | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |
| . | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
|
|
|
| B |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  | S |
|
| T | T |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
|
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
  |
  |   |
102 | . | |
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | . |
G | G | V | V | G | D | L | T | G | F | A | A | A | S | Y | Q | R | G | V | R | F | I | Q |
Query Conservation |   |
|
| . |
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |
| . | . |
|   |
|
|
|
|
Template Sequence |   |
C | C | V | Q | M | P | S | L | P | L | V | E | T | A | E | R | E | F | . |
. |
G | I | P | V | L | S |
Template Known Secondary structure |   |
S |
| S | S | S |
|
| G | G | G |  |  |  |  |  |  |  |  | . | . | T | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
|
. | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|