Job Description P07639 Confidence 24.31% Date Thu Jan 5 11:00:23 GMT 2012 Rank 281 Aligned Residues 73 % Identity 14% Template c2qzjC_ PDB info PDB header:transcription Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile Resolution 2.89 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		Q	V	M	L	V	T	N	E	T	L	A	P	L	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D	T	V	F	T	A	L	L	Q	K	P	H	G	R	D	T	T	L	.	.	.	V	A	L	G	G	G	V	V	G	D	L	T	G
Query Conservation																																																																		.	.	.
Alig confidence										.	.	.																						.	.	.	.	.	.	.	.	.	.	.																.	.	.				.	.	.
Template Conservation										.	.	.																						.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Sequence		K	I	L	I	I	D	G	D	.	.	.	K	D	N	C	Q	K	L	K	G	F	L	E	E	K	G	I	S	I	D	L	A	.	.	.	.	.	.	.	.	.	.	.	Y	N	C	E	E	A	I	G	K	I	F	S	N	K	Y	.	.	.	D	L	I	F	L	E	I	I	L	S	D	G	D	G	W	T	L	C	K
Template Known Secondary structure								S		.	.	.														T	T							.	.	.	.	.	.	.	.	.	.	.		S										T				.	.	.	S						S			T	T
Template Predicted Secondary structure										.	.	.																						.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.												.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	A	A	S	Y	Q	R	G	V	R	F	I	Q	V
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		K	I	R	.	.	N	V	T	T	C	P	I	V	Y	X
Template Known Secondary structure					.	.					S
Template Predicted Secondary structure					.	.
Template SS confidence
		69	70	.			.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions