Job Description P07639 Confidence 60.16% Date Thu Jan 5 11:00:23 GMT 2012 Rank 128 Aligned Residues 94 % Identity 12% Template c2hqbA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional activator of comk gene; PDBTitle: crystal structure of a transcriptional activator of comk2 gene from bacillus halodurans Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	V	T	N	E	T	L	A	P	L	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D	T	V	F	T	A	L	L	Q	K	P	H	G	R	D	T	T	L	V	A	L	G	G	G	V	V	G	D	L	T	G	F	A	A	A	S
Query Conservation
Alig confidence																																.	.	.	.	.																						.	.	.																				.	.
Template Conservation																																.	.	.	.	.																						.	.	.																				.	.
Template Sequence		L	L	V	E	D	T	G	W	N	R	K	A	Y	E	G	L	L	N	I	H	S	N	L	D	V	D	V	V	L	E	.	.	.	.	.	E	G	V	N	S	E	Q	K	A	H	R	R	I	K	E	L	V	D	G	G	V	.	.	.	N	L	I	F	G	H	G	H	A	F	A	E	Y	F	S	T	I	H	N	.	.
Template Known Secondary structure										T														S								.	.	.	.	.					S														T	T		.	.	.							S	T								T	T	T	T	.	.
Template Predicted Secondary structure																																.	.	.	.	.																						.	.	.																				.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	R	G	V	R	F	I	Q	V	P	T	T	L	L	S	Q	V	D	S	S	V	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Y	P	D	V	H	F	V	S	F	N	G	E	V	K	G	E	N	I	T	S	L	H	F
Template Known Secondary structure		S		T	T	S						S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions