Job Description P07639 Confidence 100.00% Date Thu Jan 5 11:00:23 GMT 2012 Rank 2 Aligned Residues 353 % Identity 26% Template c2gruB_ PDB info PDB header:lyase Chain: B: PDB Molecule:2-deoxy-scyllo-inosose synthase; PDBTitle: crystal structure of 2-deoxy-scyllo-inosose synthase2 complexed with carbaglucose-6-phosphate, nad+ and co2+ Resolution 2.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	I	V	V	T	L	G	E	R	S	Y	P	I	T	I	A	S	G	L	F	N	E	P	A	S	F	L	P	L	K	S	G	E	Q	V	M	L	V	T	N	E	T	L	A	P	L	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L
Query Conservation
Alig confidence																																																														.
Template Conservation																																																														.
Template Sequence		T	T	K	Q	I	C	F	A	D	R	C	F	N	F	A	F	G	E	H	V	L	E	S	V	E	S	Y	I	P	R	D	E	F	D	Q	Y	I	M	I	S	D	S	G	V	P	D	S	I	V	H	Y	A	A	E	Y	F	G	K	L	A	.	P	V	H	I	L	R	F	Q	G	G	E	E	Y	K	T	L	S	T	V
Template Known Secondary structure									T	T									T	T		G	G	G	G	G	G	T	S		S	S	S		S								T	T	S													T	T	T	S	.										S	G	G	G		B
Template Predicted Secondary structure																																																														.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	V	F	T	A	L	L	Q	K	P	H	G	R	D	T	T	L	V	A	L	G	G	G	V	V	G	D	L	T	G	F	A	A	A	S	Y	Q	R	G	V	R	F	I	Q	V	P	T	T	L	L	S	Q	V	D	S	S	V	G	G	K	T	A	V	N	H	P	L	G	K	N	M	I	G	A	F	Y	Q	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	L	Q	E	R	A	I	A	L	G	A	N	R	R	T	A	I	V	A	V	G	G	G	L	T	G	N	V	A	G	V	A	A	G	M	M	F	R	G	I	A	L	I	H	V	P	T	T	F	L	A	A	S	D	S	V	L	S	I	K	Q	A	V	N	L	T	S	G	K	N	L	V	G	F	Y	Y	P	P	R
Template Known Secondary structure											T	T			T	T								S														G	G	G										S						T	T	T	S	S								T	T												S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	V	V	D	L	D	C	L	K	T	L	P	P	R	E	L	A	S	G	L	A	E	V	I	K	Y	G	I	I	L	D	G	A	F	F	N	W	L	E	E	N	L	D	A	L	L	R	L	D	G	P	A	M	A	Y	C	I	R	R	C	C	E	L	K	A	E	V	V	A	A	D	E	R	E	T	G	L	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	F	A	D	T	R	I	L	S	E	S	P	P	R	Q	V	K	A	G	M	C	E	L	V	K	N	M	L	I	L	E	N	D	N	K	E	F	T	E	D	D	L	N	S	A	N	V	Y	S	P	K	Q	L	E	T	F	I	N	F	C	I	S	A	K	M	S	V	L	S	E	D	I	Y	E	K	K	K	G	L
Template Known Secondary structure												T	S																			S			S			S	S		G	G	G			S	S																								T	T		T	T	S	S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	N	L	G	H	T	F	G	H	A	I	E	A	E	M	G	Y	G	N	W	L	H	G	E	A	V	A	A	G	M	V	M	A	A	R	T	S	E	R	L	G	Q	F	S	S	A	E	T	Q	R	I	I	T	L	L	K	R	A	G	L	P	V	N	G	P	R	E	M	S	A	Q	A	Y	L	P	H	M	L	R
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		I	F	E	Y	G	H	T	I	G	H	A	I	E	L	A	E	Q	.	G	G	I	T	H	G	E	A	I	A	V	G	M	I	Y	A	A	K	I	A	N	R	M	N	L	M	P	E	H	D	V	S	A	H	Y	W	L	L	N	K	I	G	A	L	Q	D	I	P	L	K	S	D	P	D	S	I	F	H	Y	L	I	H
Template Known Secondary structure		G	G	G	T	T											T	T	.	T	S	S																				T	T	S	S															T	T	T	T	S	S					S
Template Predicted Secondary structure																			.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.						.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		D	K	K	V	L	A	G	E	M	R	L	I	L	P	L	A	I	G	K	S	E	V	R	S	G	.	.	.	.	.	V	S	H	E	L	V	L	N	A	I	A	D
Query Conservation																											.	.	.	.	.
Alig confidence					.	.																					.	.	.	.	.
Template Conservation					.	.
Template Sequence		D	N	D	.	.	E	D	N	L	G	M	I	L	L	S	G	V	G	K	P	A	M	Y	N	Q	T	L	L	T	P	V	R	K	T	L	I	K	E	V	I	R	E
Template Known Secondary structure					.	.		S										T	T					B	T	T	B	S
Template Predicted Secondary structure					.	.
Template SS confidence
		320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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