Return to main results Retrieve Phyre Job Id

Job DescriptionP07639
Confidence43.93%DateThu Jan 5 11:00:23 GMT 2012
Rank167Aligned Residues114
% Identity14%Templatec2d5nB_
PDB info PDB header:hydrolase, oxidoreductaseChain: B: PDB Molecule:riboflavin biosynthesis protein ribd; PDBTitle: crystal structure of a bifunctional deaminase and reductase2 involved in riboflavin biosynthesis
Resolution2.97 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  TLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNETLAPLYLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFT
Query Conservation        
 
 

 
    
          






          
   
   

          
       
     
Alig confidence 













































....







..







.....






Template Conservation       
 


 
    

              
             ....
   

 
..
       .....

   
 
Template Sequence  NVTKQPVRVILDTVLSIPEDAKVICDQIAPTWIFTTARADEEKKKR. . . . LSAFGVNI. . FTLETERI. . . . . QIPDVLK
Template Known Secondary structure 


S


SS



TTSTTTSS
SS
TTS
....TTTT
..SSSS
.....
Template Predicted Secondary structure 



























....


..




.....
Template SS confidence 















































































   209210.........220.........230.........240.........250.... .....260.. .......270 .......
 
   87..90.........100.........110.........120.........130......
Predicted Secondary structure 






















Query SS confidence 

















































Query Sequence  ALLQKPHGRDTTLVALGGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVD
Query Conservation            
 










 

  
     
 
 
 



  
   
Alig confidence 






...













..























Template Conservation   
   

...  





  
   ..

  





 
 


 



   
Template Sequence  ILAEEGI. . . MSVYVEGGSAVHGS. . FVKEGCFQEIIFYFAPKLIGGTHA
Template Known Secondary structure  TT
...



..T

S
S




TTS
Template Predicted Secondary structure 


...


..










Template SS confidence 

















































   278.280.... .....290........ .300.........310.........320..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions