Job Description P07639 Confidence 100.00% Date Thu Jan 5 11:00:23 GMT 2012 Rank 5 Aligned Residues 320 % Identity 36% Template c1xahA_ PDB info PDB header:lyase Chain: A: PDB Molecule:3-dehydroquinate synthase; PDBTitle: crystal structure of staphlyococcus aureus 3-dehydroquinate2 synthase (dhqs) in complex with zn2+ and nad+ Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	V	V	T	L	G	E	R	S	Y	P	I	T	I	A	S	G	L	F	N	E	P	A	S	F	L	P	L	K	S	G	E	Q	V	M	L	V	T	N	E	T	L	A	P	L	Y	L	D	K	V	R	G	V	L	E	Q	A	G	V	N	V	D	S	V	I	L	P	D	G	E	Q	Y	K	S	L	A	V	L	D
Query Conservation
Alig confidence																																	.	.																				.	.	.	.	.	.	.	.
Template Conservation																																	.	.																				.	.	.	.	.	.	.	.
Template Sequence		K	L	Q	T	T	Y	P	S	N	N	Y	P	I	Y	V	E	H	G	A	I	K	Y	I	G	T	Y	L	N	Q	F	D	.	.	Q	S	F	L	L	I	D	E	Y	V	N	Q	Y	F	A	N	K	F	D	.	.	.	.	.	.	.	.	N	V	H	K	V	I	I	P	A	G	E	K	T	K	T	F	E	Q	Y	Q
Template Known Secondary structure								S	S									T	T	G	G	G							T	T		S	.	.																				.	.	.	.	.	.	.	.									S	G	G	G	G		S
Template Predicted Secondary structure																																	.	.																				.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	F	T	A	L	L	Q	K	P	H	G	R	D	T	T	L	V	A	L	G	G	G	V	V	G	D	L	T	G	F	A	A	A	S	Y	Q	R	G	V	R	F	I	Q	V	P	T	T	L	L	S	Q	V	D	S	S	V	G	G	K	T	A	V	N	H	P	L	G	K	N	M	I	G	A	F	Y	Q	P	A	S
Query Conservation
Alig confidence																																																		.
Template Conservation																																																		.
Template Sequence		E	T	L	E	Y	I	L	S	H	H	V	T	R	N	T	A	I	I	A	V	G	G	G	A	T	G	D	F	A	G	F	V	A	A	T	L	L	R	G	V	H	F	I	Q	V	P	T	T	.	I	L	A	H	D	S	S	V	G	G	K	V	G	I	N	S	K	Q	G	K	N	L	I	G	A	F	Y	R	P	T	A
Template Known Secondary structure									T	T				T	T								S														G	G	G										S	.	T	T					T	S	S								S	S	S	T	T									S
Template Predicted Secondary structure																																																		.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		V	V	V	D	L	D	C	L	K	T	L	P	P	R	E	L	A	S	G	L	A	E	V	I	K	Y	G	I	I	L	D	G	A	F	F	N	W	L	E	E	N	L	.	D	A	L	L	R	L	D	G	P	A	M	A	Y	C	I	R	R	C	C	E	L	K	A	E	V	V	A	A	D	E	R	E	T	G	L	R	A
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		V	I	Y	D	L	D	F	L	K	T	L	P	F	K	Q	I	L	S	G	Y	A	E	V	Y	K	H	A	L	L	N	G	E	S	A	T	Q	D	I	E	Q	H	F	K	D	R	E	I	L	Q	S	L	N	G	M	D	K	Y	I	A	K	G	I	E	T	K	L	D	I	V	V	A	D	E	K	E	Q	G	V	R	K
Template Known Secondary structure						G	G	G	G	G	G																																S		S							T	T	T																			S	T	T	S	S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	N	L	G	H	T	F	G	H	A	I	E	A	E	M	G	Y	G	N	W	L	H	G	E	A	V	A	A	G	M	V	M	A	A	R	T	S	E	R	L	G	Q	F	S	S	A	E	T	Q	R	I	I	T	L	L	K	R	A	G	L	P	V	N	G	P	R	E	M	S	A	Q	A	Y	L	P	H	M	L	R
Query Conservation
Alig confidence																		.	.	.																													.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.																													.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	L	N	L	G	H	T	F	G	H	A	V	E	Y	Y	H	.	.	.	K	I	P	H	G	H	A	V	M	V	G	I	I	Y	Q	F	I	V	A	N	A	L	F	D	S	K	H	D	.	I	S	H	Y	I	Q	Y	L	I	Q	L	G	Y	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G	T	T	T											.	.	.																							T						.												T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.																													.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	K	V	L	A	G	E	M	R	L	I	L	P	L	A	I	G	K	S	E	V	R	S	G	V	S	H	E	L	V	L	N	A	I	A	D	C	Q	S
Query Conservation
Alig confidence		.	.	.	.	.	.																	.
Template Conservation		.	.	.	.	.	.																	.
Template Sequence		.	.	.	.	.	.	D	G	V	Q	M	V	L	M	R	Q	F	G	D	I	V	V	.	Q	H	V	D	Q	L	T	L	Q	H	A	C	E	Q	L	K	T
Template Known Secondary structure		.	.	.	.	.	.			B								T	T					.			B
Template Predicted Secondary structure		.	.	.	.	.	.																	.
Template SS confidence
								296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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