|   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
L | A | I | E | N | L | S | V | G | F | R | H | Q | Q | T | V | R | T | V | V | N | D | V | S | L | Q | I | E | A | G | E | T | L | A | L | V | G | E | S | G | S | G | K | S | V | T | A | L | S | I | L | R | L | L | P | S | P | P | V | E | Y | L | S | G | D | I | R | F | H | G | E | S | L | L | H | A | S | D | Q | T |
Query Conservation |   |
|   |   |   |
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|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
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|   |   |
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|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
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|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . | . | . | . |
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| . | . | . | . | . |
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| . | . | . |
Template Conservation |   |
|   |   |   |   |
|   |   |   |   |   | . | . | . | . | . |   |   |
|
|   |   |
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|   |   |
|   |   |
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|   |
|   |
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|   |   |
|   |
|   |   | . | . | . | . | . |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   | . | . | . |
Template Sequence |   |
L | E | I | R | D | L | S | V | G | Y | D | . |
. |
. |
. |
. |
K | P | V | L | E | R | I | T | M | T | I | E | K | G | N | V | V | N | F | H | G | P | N | G | I | G | K | T | T | L | L | K | T | I | S | T | Y | L | . |
. |
. |
. |
. |
K | P | L | K | G | E | I | I | Y | N | G | V | P | I | T | K | V | K | . |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | S | S | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  | T | T | S | S | . | . | . | . | . |
|
| S |  |  |  |  |  |  | T | T |  |  | G | G | G | G | G | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . |
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| . | . | . |
Template SS confidence |   |
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  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | |
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. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
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. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
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  |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
L | R | G | V | R | G | N | K | I | A | M | I | F | Q | E | P | M | V | S | L | N | P | L | H | T | L | E | K | Q | L | Y | E | V | L | S | L | H | R | G | M | R | R | E | A | A | R | G | E | I | L | N | C | L | D | R | V | G | I | R | Q | A | A | K | R | L | T | D | Y | P | H | Q | L | S | G | G | E | R | Q | R | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
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Alig confidence |   |
. | . | . | . | . | . |
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| . | . |
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| . | . | . |
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| . | . | . | . |
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Template Conservation |   |
. | . | . | . | . | . |   |   |
|   |   |   |   |
|   |   |   | . | . |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   | . | . | . | . |
|   |   |   |   |   |   |
|
|   |
|   |   |   |
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
G | K | I | F | F | L | P | E | E | I | I | . |
. |
V | P | R | K | I | S | V | E | D | Y | L | K | A | V | A | S | L | Y | G | V | K | V | N | . |
. |
. |
K | N | E | I | M | D | A | L | E | S | V | E | V | L | D | . |
. |
. |
. |
L | K | K | K | L | G | E | L | S | Q | G | T | I | R | R | V |
Template Known Secondary structure |   |
. | . | . | . | . | . | G | G |  |  |  |  |
| S | S |
|
| . | . |
|
| T | T | S | B |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| . | . | . | . | T | T | S | B | G | G | G | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . |
|
|  |  |  |  |  |
|
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|
| . | . |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . | . |  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . |
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|  |  |  |  |
Template SS confidence |   |
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  |   |
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70 | . | . | . | . | . | . | . | . | . | 80 | |
|
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
|
|
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
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|
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
  |
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
|
|
Query SS confidence |   |
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Query Sequence |   |
M | I | A | M | A | L | L | T | R | P | E | L | L | I | A | D | E | P | T | T | A | L | D | V | S | V | Q | A | Q | I | L | Q | L | L | R | E | L | Q | G | E | L | N | M | G | M | L | F | I | T | H | N | L | S | I | V | R | K | L | A | H | R | V | A | V | M | Q | N | G |
Query Conservation |   |
  |
|
|   |
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|   |   |   |
|   |
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|   |   |
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|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
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|   |
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|   |   |   |   |
|   |   |   |   |
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|   |
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|   |   |
|
Alig confidence |   |
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| . | . | . | . |
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Template Conservation |   |
  |
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|   |
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|   |   |   |
|   |
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|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
| . | . | . | . |   |   |   |
|   |   |   |   |
|   |   |   |
Template Sequence |   |
Q | L | A | S | T | L | L | V | N | A | E | I | Y | V | L | D | D | P | V | V | A | I | D | E | D | S | K | H | K | V | L | K | S | I | L | E | I | L | K | E | K | G | I | V | I | I | S | S | R | E | E | L | . |
. |
. |
. |
S | Y | C | D | V | N | E | N | L | H | K | Y |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | S |
|
| S |  |  |  |  |  | S | T | T | T | T | S |
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  | S | S |
|
| . | . | . | . | T | T | S | S |  |  |  |  | G | G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
|
|  |  |  |  |
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Template SS confidence |   |
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  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | |
|
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. | . | . | 190 | . | . | . | . | . | . | . | . |
  |