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Job DescriptionP33916
Confidence100.00%DateThu Jan 5 11:52:44 GMT 2012
Rank3Aligned Residues465
% Identity20%Templatec3ozxA_
PDB info PDB header:hydrolase, translationChain: A: PDB Molecule:rnase l inhibitor; PDBTitle: crystal structure of abce1 of sulfolubus solfataricus (-fes domain)
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVEYLSGDIRFHGESLLHASDQTLRGV
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Template Sequence  EVIHRYKVNG. . . FKLFGLP. TPKNNTILGVLGKNGVGKTTVLKILAGEI. . . . . IPNFGDP. . . . . NSKVGKDEVLKRF
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   78.80....... ..90.... .....100.........110.........120... ......130 .........140...
 
   90.........100.........110.........120.........130... ......140.........150.........160....
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Query Sequence  RGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGE. . . . . ILNCLDRVGIRQAAKRLTDYPHQLSGGERQR
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Template Sequence  RGKEIYNYFKELYSNELKIVHKIQYVEYASKFLKGTVNEILTKIDERGKKDEVKELLNMTNL. . . WNKDANILSGGGLQR
Template Known Secondary structure  TTSTTTT



S
TTGGGTT

SB

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TT
GGG...TTSBGGG

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   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  VMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNYAATL
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Template Sequence  LLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELLK. . NKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRV. . . .
Template Known Secondary structure  S

SSTTTT


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   221........230.........240.........250.........260 .........270.........280.........290....
 
   245....250.........260.........270.........280.........290.........300.........310.........320....
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Query Sequence  FASPTHPYTQKLLNSEPSGDPVPLPEPASTLLDVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSG
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Template Sequence  . . . . SKSYAARVGINNFLKGYLPAENMKIRPDEIKFMLKLKTKMKWTKIIKKLGDFQLVVDNGEAKEGEIIGILGPNGIG
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TTTTT
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TT

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   295....300.........310.........320.........330.........340.........350.........360.........370
 
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Query Sequence  KSTTGLALLRLI. NSQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQ
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Template Sequence  KTTFARILVGEITADEGSVTPEKQ. . . . . . . . . . . . . . . ILSYKPQRI. . FPNYDGTVQQYLENASKDALSTSS. . . . . W
Template Known Secondary structure  TTSS

SB

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   381........390.........400.... .....410... ......420.........430....... .
 
   404.....410.........420.........430.........440.........450.........460.........470.........480...
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Query Sequence  QVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYLFIS
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Template Sequence  FFEEVTKRLNLH. RLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTRERKAVTFIID
Template Known Secondary structure  TTTTTTGG.G
TTSBGGG

S

SSTTTT

TT

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Query Sequence  HDLHVVRALCHQVIILRQGEVVEQGPCAR. . VFATPQQEYTRQL
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Template Sequence  HDLSIHDYIADRIIVFK. GEPEKAGLATSPVTLKTGMNEFLREL
Template Known Secondary structure  S

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   518.520.........530.... .....540.........550.........560
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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