Job Description P33916 Confidence 100.00% Date Thu Jan 5 11:52:44 GMT 2012 Rank 24 Aligned Residues 231 % Identity 29% Template c3gfoA_ PDB info PDB header:atp binding protein Chain: A: PDB Molecule:cobalt import atp-binding protein cbio 1; PDBTitle: structure of cbio1 from clostridium perfringens: part of2 the abc transporter complex cbionq. Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	L	L	A	I	E	N	L	S	V	G	F	R	H	Q	Q	T	V	R	T	V	V	N	D	V	S	L	Q	I	E	A	G	E	T	L	A	L	V	G	E	S	G	S	G	K	S	V	T	A	L	S	I	L	R	L	L	P	S	P	P	V	E	Y	L	S	G	D	I	R	F	H	G	E	S	L	L	H	A	S
Query Conservation
Alig confidence																.	.	.																																									.	.	.	.	.															.
Template Conservation																.	.	.																																									.	.	.	.	.															.
Template Sequence		D	Y	I	L	K	V	E	E	L	N	Y	N	Y	S	.	.	.	D	G	T	H	A	L	K	G	I	N	M	N	I	K	R	G	E	V	T	A	I	L	G	G	N	G	V	G	K	S	T	L	F	Q	N	F	N	G	I	L	.	.	.	.	.	K	P	S	S	G	R	I	L	F	D	N	K	P	I	.	D	Y	S
Template Known Secondary structure															T	.	.	.	T	S													T	T	S								T	T	S	S									T	T	S	S	.	.	.	.	.			S							T	T				.			S
Template Predicted Secondary structure																.	.	.																																									.	.	.	.	.															.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	T	L	R	G	V	R	G	N	K	I	A	M	I	F	Q	E	P	M	V	S	L	N	P	L	H	T	L	E	K	Q	L	Y	E	V	L	S	L	H	R	G	M	R	R	E	A	A	R	G	E	I	L	N	C	L	D	R	V	G	I	R	Q	A	A	K	R	L	T	D	Y	P	H	Q	L	S	G	G	E	R
Query Conservation
Alig confidence												.																													.	.																								.	.	.
Template Conservation												.																													.	.																								.	.	.
Template Sequence		R	K	G	I	M	K	L	R	E	S	.	I	G	I	V	F	Q	D	P	D	N	Q	L	F	S	A	S	V	Y	Q	D	V	S	F	G	A	V	N	M	.	.	K	L	P	E	D	E	I	R	K	R	V	D	N	A	L	K	R	T	G	I	E	H	L	.	.	.	K	D	K	P	T	H	C	L	S	F	G	Q	K
Template Known Secondary structure											S	.						S	S	G	G	G	T			S	S	B											T	S	.	.																		T	T		G	G	G	.	.	.	T	T	S	B	G	G	G	S
Template Predicted Secondary structure												.																													.	.																								.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	V	M	I	A	M	A	L	L	T	R	P	E	L	L	I	A	D	E	P	T	T	A	L	D	V	S	V	Q	A	Q	I	L	Q	L	L	R	E	L	Q	G	E	L	N	M	G	M	L	F	I	T	H	N	L	S	I	V	R	K	L	A	H	R	V	A	V	M	Q	N	G	R	C	V	E	Q	N	Y	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	V	A	I	A	G	V	L	V	M	E	P	K	V	L	I	L	D	E	P	T	A	G	L	D	P	M	G	V	S	E	I	M	K	L	L	V	E	M	Q	K	E	L	G	I	T	I	I	I	A	T	H	D	I	D	I	V	P	L	Y	C	D	N	V	F	V	M	K	E	G	R	V	I	L	Q	G	N	P	K
Template Known Secondary structure											T	T			S							T	T	T	T																													S			S	S	G	G	G	G		S							T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		243	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	F	A	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	F	A	E	K
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions