Return to main results Retrieve Phyre Job Id

Job DescriptionP33916
Confidence100.00%DateThu Jan 5 11:52:44 GMT 2012
Rank20Aligned Residues239
% Identity30%Templatec3fvqB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:fe(3+) ions import atp-binding protein fbpc; PDBTitle: crystal structure of the nucleotide binding domain fbpc2 complexed with atp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  TLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVEYLSGDIRFHGESLLHASD
Query Conservation    
   


  
         
  

  
  

   


 








  
 
 
        

 
   
        
Alig confidence 











....







































.....


















Template Conservation 
 
 
  
   
....     
  


 
  

   


 








  
 
  .....    
 
   
  
     
Template Sequence  AALHIGHLSKSF. . . . QNTPVLNDISLSLDPGEILFIIGASGCGKTTLLRCLAGFE. . . . . QPDSGEISLSGKTIFSKNT
Template Known Secondary structure 

....TT
TT
STTSSTSS.....

STTTT
Template Predicted Secondary structure 
....
















.....












Template SS confidence 















































































   3......10.... .....20.........30.........40.........50.... .....60.........70...
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  QTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQ
Query Conservation            
  
 
     
                                
    
      
      






Alig confidence 



..












..
















.























...













Template Conservation      ..    
        ..      
          .               
    
   ...       




 
Template Sequence  NLPV. . RERRLGYLVQEGV. . LFPHLTVYRNIAYGLGN. GKGRTAQERQRIEAMLELTGISEL. . . AGRYPHELSGGQQQ
Template Known Secondary structure 

G..GG



TT

..

TTS
TTSTT.SS

ST
GGG...TT

GGGS
Template Predicted Secondary structure 


..










..
















.







...








Template SS confidence 















































































   74... ..80.........90 .........100....... ..110.........120.........130. ........140.....
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  RVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNYAAT
Query Conservation 

 

 

   
 







  

      
   
  
    
 


 


    
    


 

  
 

       
Alig confidence 















































































Template Conservation 

 




   
 








 

      
   
  
    
 


 


   
     
 
 

  
 
   
   
Template Sequence  RAALARALAPDPELILLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRILQTASPHE
Template Known Secondary structure  TT

SSTTTTS
TT




STT
Template Predicted Secondary structure 




















Template SS confidence 















































































   146...150.........160.........170.........180.........190.........200.........210.........220.....
 
   244.....250.........
Predicted Secondary structure 










Query SS confidence 















Query Sequence  LFASPTHPYTQKLLNS
Query Conservation                  
Alig confidence 















Template Conservation 
   
     
   
 
Template Sequence  LYRQPADLDAALFIGE
Template Known Secondary structure  S
SSS
Template Predicted Secondary structure 







Template SS confidence 















   226...230.........240.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions